tRNA genes clustered and arranged according to each identical group

Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)

Anticodon = TAT

HIT: 9 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.8753 (2 seq.)
>WENV170897076 MDTD01105583 [MDTD] marine metagenome; seawater 19484 19391 - Ile TAT [ENA] ¢þ
>SRA1006258 SRR020488.21177 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 116 23 - Ile TAT [SRA]
Identical group No.9168 (3 seq.)
>WENV170587490 FUFK010496805 [FUFK] metagenome; unknown 4 97 + Ile TAT [ENA] ¢þ
>WENV170907353 MDTE01050831 [MDTE] marine metagenome; seawater 3657 3750 + Ile TAT [ENA] ¢þ
>SRA1012922 SRR020493.484227 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 103 196 + Ile TAT [SRA]
Identical group No.235264 (9 seq.)
>WENV170165306 CEON01103167 [CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 532 456 - Ile TAT [ENA] ¢þ
>WENV170175497 CEOR01043120 [CEOR] marine metagenome genome assembly TARA_064_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 786 710 - Ile TAT [ENA] ¢þ
>WENV170177980 CEOU01181031 [CEOU] marine metagenome genome assembly TARA_065_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 979 1055 + Ile TAT [ENA] ¢þ
>WENV170250981 CEQT01043044 [CEQT] marine metagenome genome assembly TARA_072_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8533 8609 + Ile TAT [ENA] ¢þ
>WENV170267102 CERF01003872 [CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 829 753 - Ile TAT [ENA] ¢þ
>WENV170269202 CERH01071405 [CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2070 1994 - Ile TAT [ENA] ¢þ
>WENV170283268 CERT01122316 [CERT] marine metagenome genome assembly TARA_065_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 90 14 - Ile TAT [ENA] ¢þ
>WENV170828336 MDSY01147720 [MDSY] marine metagenome; seawater 8928 9004 + Ile TAT [ENA] ¢þ
>SRA1012857 SRR020493.456707 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 107 31 - Ile TAT [SRA]
Identical group No.357333 (5 seq.)
>WENV170365186 CETN01027709 [CETN] marine metagenome genome assembly TARA_122_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 201 125 - Ile TAT [ENA] ¢þ
>WENV170408646 CEUI01050375 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1166 1090 - Ile TAT [ENA] ¢þ
>WENV170458560 CEVB01103265 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 56 132 + Ile TAT [ENA] ¢þ
>WENV170522810 CEWG01133993 [CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 77 + Ile TAT [ENA] ¢þ
>SRA1008588 SRR020490.424724 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 149 73 - Ile TAT [SRA]
Identical group No.453061 (3 seq.)
>WENV170229799 CEQG01177810 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 516 442 - Ile TAT [ENA] ¢þ
>WENV170299733 CESG01057395 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 479 553 + Ile TAT [ENA] ¢þ
>SRA1009458 SRR020491.238538 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 239 165 - Ile TAT [SRA]
Identical group No.484018 (10 seq.)
>WENV170141901 CENX01238087 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 153 228 + Ile TAT [ENA] ¢þ
>WENV170154797 CEOF01242684 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 161 86 - Ile TAT [ENA] ¢þ
>WENV170156555 CEOI01046330 [CEOI] marine metagenome genome assembly TARA_036_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 106 181 + Ile TAT [ENA] ¢þ
>WENV170583876 FUFK010170907 [FUFK] metagenome; unknown 208 133 - Ile TAT [ENA] ¢þ
>WENV170594621 FUFK011397709 [FUFK] metagenome; unknown 288 362 + Ile TAT [ENA] ¢þ
>WENV170837973 MDSZ01158983 [MDSZ] marine metagenome; seawater 24 99 + Ile TAT [ENA] ¢þ
>WENV170851922 MDTA01140235 [MDTA] marine metagenome; seawater 724 799 + Ile TAT [ENA] ¢þ
>WENV170858720 MDTB01026338 [MDTB] marine metagenome; seawater 452 527 + Ile TAT [ENA] ¢þ
>WENV170874115 MDTB01241930 [MDTB] marine metagenome; seawater 4203 4128 - Ile TAT [ENA] ¢þ
>SRA1006923 SRR020488.266388 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 197 122 - Ile TAT [SRA]
Identical group No.503406 (15 seq.)
>WENV180047788 MPLT02268503 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 98 173 + Ile TAT [ENA] ¢þ
>WENV180052199 MPLU02276049 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 250 175 - Ile TAT [ENA] ¢þ
>ENV08000975 ABMN01136705 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 97 22 - Ile TAT [ENA] ¡û
>WENV183796924 PVBE010289452 [PVBE] marine metagenome; water 1501 1576 + Ile TAT [ENA] ¢þ
>WENV170307886 CESK01021111 [CESK] marine metagenome genome assembly TARA_078_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4 79 + Ile TAT [ENA] ¢þ
>WENV170340812 CETC01035383 [CETC] marine metagenome genome assembly TARA_122_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 135 210 + Ile TAT [ENA] ¢þ
>WENV170423861 CEUO01036697 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2658 2583 - Ile TAT [ENA] ¢þ
>WENV170512642 CEVZ01216243 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 383 308 - Ile TAT [ENA] ¢þ
>WENV170583861 FUFK010169003 [FUFK] metagenome; unknown 932 857 - Ile TAT [ENA] ¢þ
>WENV170583864 FUFK010169003 [FUFK] metagenome; unknown 444 369 - Ile TAT [ENA] ¢þ
>WENV170584013 FUFK010183721 [FUFK] metagenome; unknown 935 860 - Ile TAT [ENA] ¢þ
>WENV170829535 MDSZ01010611 [MDSZ] marine metagenome; seawater 750 825 + Ile TAT [ENA] ¢þ
>WENV170841046 MDSZ01215312 [MDSZ] marine metagenome; seawater 150 225 + Ile TAT [ENA] ¢þ
>SRA1000988 SRR001051.80207 Line Islands Corals viral fraction from water of Fanning (SRP000143) 97 22 - Ile TAT [SRA]
>SRA1008381 SRR020490.336509 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 232 157 - Ile TAT [SRA]
Identical group No.525512 (2 seq.)
>WENV181318205 OFJZ01004649 [OFJZ] marine metagenome; seawater 584 656 + Ile TAT [ENA] ¢þ
>SRA1011756 SRR020493.68160 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 74 146 + Ile TAT [SRA]
Identical group No.540713 (3 seq.)
>WENV170886585 MDTC01223892 [MDTC] marine metagenome; seawater 807 880 + Ile TAT [ENA] ¢þ
>SRA1007748 SRR020490.39112 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 164 237 + Ile TAT [SRA]
>SRA1008302 SRR020490.304056 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 162 235 + Ile TAT [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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