tRNA genes clustered and arranged according to each identical group

Thermoproteota

Anticodon = CCT

HIT: 26 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.236220 (2 seq.)
>A171000152 CP000852 Thermoproteota Caldivirga maquilingensis IC-167 [CP000852] 117141 117219 + Arg CCT - ¡û
>W1610000405 AAXQ01000001 Thermoproteota Caldivirga maquilingensis IC-167 [AAXQ] 1215099 1215021 - Arg CCT [ENA] ¡û
Identical group No.241271 (5 seq.)
>A179000276 CP002817 Thermoproteota Sulfolobus acidocaldarius N8 [CP002817] 1241054 1240963 - Arg CCT - ¡û
>A179000283 CP002818 Thermoproteota Sulfolobus acidocaldarius Ron12/I [CP002818] 1241061 1240970 - Arg CCT - ¡û
>A179000460 CP006977 Thermoproteota Sulfolobus acidocaldarius SUSAZ [CP006977] 1199390 1199299 - Arg CCT - ¡û
>At0464 CP000077 Thermoproteota Sulfolobus acidocaldarius DSM 639 [CP000077] 1241050 1240959 - Arg CCT [Ensembl] ¡û
>At0555 BA000023 Thermoproteota Sulfurisphaera tokodaii str. 7 [BA000023] 1370683 1370585 - Arg CCT [Ensembl] ¡û
Identical group No.242127 (6 seq.)
>A178000108 CP001800 Thermoproteota Saccharolobus solfataricus [CP001800] 1218259 1218171 - Arg CCT - ¡û
>A178000529 CP011055 Thermoproteota Saccharolobus solfataricus SARC-B [CP011055] 1276422 1276334 - Arg CCT - ¡û
>A178000539 CP011056 Thermoproteota Saccharolobus solfataricus SARC-C [CP011056] 1276427 1276339 - Arg CCT - ¡û
>A178000549 CP011057 Thermoproteota Saccharolobus solfataricus SULA [CP011057] 1276449 1276361 - Arg CCT - ¡û
>A178000746 LT549890 Thermoproteota Saccharolobus solfataricus P1 [LT549890] 291945 291857 - Arg CCT - ¡û
>At0499 AE006641 Thermoproteota Saccharolobus solfataricus P2 [AE006641] 290978 290891 - Arg CCT [Ensembl] ¡û
Identical group No.242891 (3 seq.)
>A17A000461 CP002098 Thermoproteota Ignisphaera aggregans DSM 17230 [CP002098] 888837 888744 - Arg CCT - ¡û
>A179000172 CP002098 Thermoproteota Ignisphaera aggregans DSM 17230 [CP002098] 888837 888744 - Arg CCT - ¡û
>WENV181229011 OFEJ01000047 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 3967 3890 - Arg CCT [ENA] ¢þ
Identical group No.242946 (9 seq.)
>A171000367 CP001140 Thermoproteota Desulfurococcus amylolyticus 1221n [CP001140] 895144 895068 - Arg CCT - ¡û
>A171001831 CP002363 Thermoproteota Desulfurococcus mucosus DSM 2162 [CP002363] 993820 993894 + Arg CCT - ¡û
>A171002981 CP003321 Thermoproteota Desulfurococcus amylolyticus DSM 16532 [CP003321] 1016388 1016312 - Arg CCT - ¡û
>A171003239 CP003531 Thermoproteota Thermogladius calderae 1633 [CP003531] 905312 905387 + Arg CCT - ¡û
>WENV181229380 OFEJ01007455 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 1061 1136 + Arg CCT [ENA] ¢þ
>WENV181229381 OFEJ01007467 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 1061 1136 + Arg CCT [ENA] ¢þ
>W1910003090 AUQX01000013 Thermoproteota Desulfurococcus mucosus DSM 2161 [AUQX] 6503 6429 - Arg CCT [ENA] ¡û
>W1610004200 AGIW01000001 Thermoproteota Desulfurococcus amylolyticus DSM 16532 [AGIW] 93931 94008 + Arg CCT [ENA] ¡û
>W1610040475 AZUU01000002 Thermoproteota Desulfurococcus amylolyticus Z-533 [AZUU] 487826 487749 - Arg CCT [ENA] ¡û
Identical group No.242962 (7 seq.)
>A171001003 CP001742 Thermoproteota Acidilobus saccharovorans 345-15 [CP001742] 125759 125682 - Arg CCT - ¡û
>WENV181228658 OFEH01000799 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 1 78 + Arg CCT [ENA] ¢þ
>WENV181228773 OFEH01003855 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 1637 1713 + Arg CCT [ENA] ¢þ
>WENV181228792 OFEH01005327 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 1162 1238 + Arg CCT [ENA] ¢þ
>WENV181229487 OFEJ01019938 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 822 899 + Arg CCT [ENA] ¢þ
>WENV181407311 OGCG01016459 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 625 548 - Arg CCT [ENA] ¢þ
>ENV09004089 ADKH01000655 Hot springs metagenome ctg_1106445186506 779 856 + Arg CCT [ENA] ¡û
Identical group No.242965 (8 seq.)
>A171001698 CP002100 Thermoproteota Vulcanisaeta distributa DSM 14429 [CP002100] 1622515 1622440 - Arg CCT - ¡û
>A171001979 CP002529 Thermoproteota Vulcanisaeta moutnovskia 768-28 [CP002529] 2211971 2212048 + Arg CCT - ¡û
>WENV181228569 OFEH01000245 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 10591 10514 - Arg CCT [ENA] ¢þ
>WENV181229529 OFEJ01028173 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 78 1 - Arg CCT [ENA] ¢þ
>W1910599140 LCWN02000106 Thermoproteota Vulcanisaeta sp. EB80 [LCWN] 1858 1781 - Arg CCT [ENA] ¡û
>W1610024271 ATWG01000001 Thermoproteota Stygiolobus azoricus DSM 6296 [ATWG] 482680 482757 + Arg CCT [ENA] ¡û
>W1610047670 BBDM01000011 Thermoproteota Vulcanisaeta sp. JCM 14467 [BBDM] 54700 54623 - Arg CCT [ENA] ¡û
>W1610047712 BBDO01000006 Thermoproteota Vulcanisaeta sp. JCM 16161 [BBDO] 237399 237476 + Arg CCT [ENA] ¡û
Identical group No.244807 (5 seq.)
>A171000135 AP012489 Thermoproteota Aeropyrum camini SY1 = JCM 12091 [AP012489] 1222124 1222047 - Arg CCT - ¡û
>At0044 BA000002 Thermoproteota Aeropyrum pernix K1 [BA000002] 1275750 1275673 - Arg CCT [Ensembl] ¡û
>At0134 CP000493 Thermoproteota Hyperthermus butylicus DSM 5456 [CP000493] 1024095 1024018 - Arg CCT [Ensembl] ¡û
>W1910015308 BDMD01000045 Thermoproteota Aeropyrum pernix YK1-12-2013 [BDMD] 3075 2998 - Arg CCT [ENA] ¡û
>W1610045970 BBBZ01000022 Thermoproteota Aeropyrum camini SY1 = JCM 12091 [BBBZ] 1790 1867 + Arg CCT [ENA] ¡û
Identical group No.244891 (7 seq.)
>A178000243 CP002656 Thermoproteota Metallosphaera cuprina Ar-4 [CP002656] 538909 538997 + Arg CCT - ¡û
>A178000573 CP012172 Thermoproteota Metallosphaera sedula ARS50-1 [CP012172] 1581291 1581200 - Arg CCT - ¡û
>A178000590 CP012173 Thermoproteota Metallosphaera sedula ARS50-2 [CP012173] 1581287 1581196 - Arg CCT - ¡û
>A178000607 CP012174 Thermoproteota Metallosphaera sedula ARS120-1 [CP012174] 1581289 1581198 - Arg CCT - ¡û
>A178000624 CP012175 Thermoproteota Metallosphaera sedula ARS120-2 [CP012175] 1581291 1581200 - Arg CCT - ¡û
>A178000641 CP012176 Thermoproteota Metallosphaera sedula SARC-M1 [CP012176] 1581291 1581200 - Arg CCT - ¡û
>At0176 CP000682 Thermoproteota Metallosphaera sedula DSM 5348 [CP000682] 1581275 1581185 - Arg CCT [Ensembl] ¡û
Identical group No.245505 (2 seq.)
>A171002948 CP003316 Thermoproteota Pyrobaculum oguniense TE7 [CP003316] 1341862 1341939 + Arg CCT - ¡û
>At0255 CP000660 Thermoproteota Pyrobaculum arsenaticum DSM 13514 [CP000660] 705110 705033 - Arg CCT [Ensembl] ¡û
Identical group No.245520 (2 seq.)
>At0226 AE009441 Thermoproteota Pyrobaculum aerophilum str. IM2 [AE009441] 1298281 1298180 - Arg CCT [Ensembl] ¡û
>At0292 CP000561 Thermoproteota Pyrobaculum calidifontis JCM 11548 [CP000561] 876265 876358 + Arg CCT [Ensembl] ¡û
Identical group No.252729 (1 seq.)
>A171003222 CP003423 Thermoproteota Fervidicoccus fontis Kam940 [CP003423] 145541 145467 - Arg CCT - ¡û
Identical group No.252759 (9 seq.)
>A178000036 CP001399 Thermoproteota Sulfolobus islandicus L.S.2.15 [CP001399] 1739568 1739656 + Arg CCT - ¡û
>A178000046 CP001400 Thermoproteota Sulfolobus islandicus M.14.25 [CP001400] 1635698 1635786 + Arg CCT - ¡û
>A178000056 CP001401 Thermoproteota Sulfolobus islandicus M.16.27 [CP001401] 1761596 1761684 + Arg CCT - ¡û
>A178000066 CP001402 Thermoproteota Sulfolobus islandicus M.16.4 [CP001402] 1661828 1661916 + Arg CCT - ¡û
>A178000076 CP001403 Thermoproteota Sulfolobus islandicus Y.G.57.14 [CP001403] 1693701 1693789 + Arg CCT - ¡û
>A178000087 CP001404 Thermoproteota Sulfolobus islandicus Y.N.15.51 [CP001404] 932922 932834 - Arg CCT - ¡û
>A178000190 CP002425 Thermoproteota Sulfolobus islandicus REY15A [CP002425] 1541426 1541514 + Arg CCT - ¡û
>A178000200 CP002426 Thermoproteota Sulfolobus islandicus HVE10/4 [CP002426] 1685910 1685998 + Arg CCT - ¡û
>A178000355 CP003928 Thermoproteota Sulfolobus islandicus LAL14/1 [CP003928] 1526901 1526989 + Arg CCT - ¡û
Identical group No.252771 (1 seq.)
>A179000691 CP020477 Thermoproteota Acidianus manzaensis YN-25 [CP020477] 2105621 2105532 - Arg CCT - ¡û
Identical group No.256455 (1 seq.)
>A171002442 CP002838 Thermoproteota Pyrolobus fumarii 1A [CP002838] 98602 98525 - Arg CCT - ¡û
Identical group No.256472 (1 seq.)
>A17A000074 CP001014 Thermoproteota Pyrobaculum neutrophilum V24Sta [CP001014] 1221709 1221809 + Arg CCT - ¡û
Identical group No.259851 (3 seq.)
>A171001332 CP001939 Thermoproteota Thermosphaera aggregans DSM 11486 [CP001939] 968754 968829 + Arg CCT - ¡û
>WENV181404421 OGCA01002471 [OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA 1921 1847 - Arg CCT [ENA] ¢þ
>WENV181404520 OGCA01009103 [OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA 588 513 - Arg CCT [ENA] ¢þ
Identical group No.259875 (3 seq.)
>A171006434 CP013011 Thermoproteota Pyrodictium delaneyi Su06 [CP013011] 1888307 1888384 + Arg CCT - ¡û
>W1910870011 NCQP01000002 Thermoproteota Pyrodictium delaneyi Hulk [NCQP] 187410 187333 - Arg CCT [ENA] ¡û
>W1610772492 LNTB01000001 Thermoproteota Pyrodictium occultum PL-19 [LNTB] 236152 236229 + Arg CCT [ENA] ¡û
Identical group No.260123 (1 seq.)
>At0337 CP000504 Thermoproteota Pyrobaculum islandicum DSM 4184 [CP000504] 741900 741997 + Arg CCT [Ensembl] ¡û
Identical group No.261142 (1 seq.)
>A179000233 CP002535 Thermoproteota Acidianus hospitalis W1 [CP002535] 1174229 1174141 - Arg CCT - ¡û
Identical group No.261439 (2 seq.)
>A178000149 CP002051 Thermoproteota Staphylothermus hellenicus DSM 12710 [CP002051] 1280466 1280563 + Arg CCT - ¡û
>At0415 CP000575 Thermoproteota Staphylothermus marinus F1 [CP000575] 1101838 1101742 - Arg CCT [Ensembl] ¡û
Identical group No.261590 (1 seq.)
>At2213 CP000816 Thermoproteota Ignicoccus hospitalis KIN4/I [CP000816] 1134528 1134624 + Arg CCT [Ensembl] ¡û
Identical group No.262403 (1 seq.)
>A178000682 CP017006 Thermoproteota Sulfolobus sp. A20 [CP017006] 755022 755112 + Arg CCT - ¡û
Identical group No.262407 (1 seq.)
>A179000449 CP006867 Thermoproteota Ignicoccus islandicus DSM 13165 [CP006867] 665939 665833 - Arg CCT - ¡û
Identical group No.269535 (1 seq.)
>A173000100 CP003378 Thermoproteota Caldisphaera lagunensis DSM 15908 [CP003378] 51007 51084 + Arg CCT - ¡û
Identical group No.288094 (4 seq.)
>A171003850 CP006646 Thermoproteota Thermofilum adornatum 1910b [CP006646] 799001 799077 + Arg CCT - ¡û
>A171004309 CP007493 Thermoproteota Thermofilum adornatum 1505 [CP007493] 1728428 1728504 + Arg CCT - ¡û
>WENV181229019 OFEJ01000069 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 14754 14830 + Arg CCT [ENA] ¢þ
>At0577 CP000505 Thermoproteota Thermofilum pendens Hrk 5 [CP000505] 600252 600348 + Arg CCT [Ensembl] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK