tRNA genes clustered and arranged according to each identical group

Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)

Anticodon = GCA

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.186047 (2 seq.)
>ENV08000814 ABMJ01048758 freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) 92 8 - Cys GCA [ENA] ¡û
>SRA1000790 SRR001047.65410 Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139) 92 8 - Cys GCA [SRA]
Identical group No.787948 (2 seq.)
>ENV08000849 ABMJ01201311 freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) 87 14 - Cys GCA [ENA] ¡û
>SRA1000778 SRR001047.36160 Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139) 87 14 - Cys GCA [SRA]
Identical group No.787951 (3 seq.)
>ENV08000829 ABMJ01089345 freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) 100 27 - Cys GCA [ENA] ¡û
>SRA1000844 SRR001047.246891 Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139) 100 27 - Cys GCA [SRA]
>SRA1000851 SRR001047.278362 Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139) 100 27 - Cys GCA [SRA]
Identical group No.788315 (2 seq.)
>ENV08000846 ABMJ01162315 freshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) 28 100 + Pseudo GCA [ENA] ¡û
>SRA1000800 SRR001047.96546 Tilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139) 28 100 + Cys GCA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK