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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09003586
ADGO01095698
501913
Actinomycetota
GCA
Cys
>ENV09003243
ADGO01012945
281498
Actinomycetota
ACG
Arg
>ENV09002991
ADGO01000679
179773
Actinomycetota
GTC
Asp
>ENV09003587
ADGO01095698
444550
Actinomycetota
GAC
Val
>ENV09002961
ADGO01000232
179771
Actinomycetota
GAT
Ile
>ENV09002963
ADGO01000237
176345
Actinomycetota
CGG
Pro
>ENV09003411
ADGO01033164
452695
Actinomycetota
GAC
Val
>ENV09003620
ADGO01108162
303819
Actinomycetota
GGC
Ala
>ENV09003890
ADGO01204418
13341
Actinomycetota
GCT
Ser
>ENV09003127
ADGO01006010
281632
Actinomycetota
CAT
Met
>ENV09003691
ADGO01136133
150403
Actinomycetota
TTG
Gln
>ENV09003095
ADGO01004494
481412
Actinomycetota
GCA
Cys
>ENV09003841
ADGO01192024
208452
Actinomycetota
GAT
Ile
>ENV09003425
ADGO01038975
463627
Actinomycetota
CAC
Val
>ENV09003746
ADGO01165319
328601
Actinomycetota
CCT
Arg
>ENV09003218
ADGO01011822
285912
Actinomycetota
TTC
Glu
>ENV09003247
ADGO01013168
284583
Actinomycetota
GGC
Ala
>ENV09003248
ADGO01013169
284583
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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