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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182640756
OJLD01000645
235615
Actinomycetota
TGC
Ala
>WENV182640761
OJLD01000858
37831
Actinomycetota
GGA
Ser
>WENV182640727
OJLD01000127
235605
Actinomycetota
CGT
Thr
>WENV182640772
OJLD01001462
96217
Actinomycetota
TAG
Leu
>WENV182640712
OJLD01000024
107102
Actinomycetota
GTA
Tyr
>WENV182640782
OJLD01001742
145084
Actinomycetota
GGG
Pro
>WENV182640769
OJLD01001355
235606
Actinomycetota
GGT
Thr
>WENV182640726
OJLD01000102
3286
Actinomycetota
>WENV182640757
OJLD01000709
235663
Actinomycetota
TTT
Lys
>WENV182640785
OJLD01002048
299116
Actinomycetota
TGT
Thr
>WENV182640770
OJLD01001355
338474
Actinomycetota
CAT
Met
>WENV182640758
OJLD01000709
235574
Actinomycetota
TTC
Glu
>WENV182640729
OJLD01000150
16526
Actinomycetota
CGA
Ser
>WENV182640767
OJLD01001329
37093
Actinomycetota
GAG
Leu
>WENV182640787
OJLD01002253
235384
Actinomycetota
GTG
His
>WENV182640744
OJLD01000292
148463
Actinomycetota
TAA
Leu
>WENV182640760
OJLD01000709
238648
Actinomycetota
GAA
Phe
>WENV182640759
OJLD01000709
149270
Actinomycetota
GTC
Asp
>WENV182640786
OJLD01002243
155153
Actinomycetota
CAT
Met
>WENV182640763
OJLD01001017
235655
Actinomycetota
GTT
Asn
>WENV182640768
OJLD01001346
182307
Actinomycetota
TCT
Arg
>WENV182640765
OJLD01001301
338387
Actinomycetota
>WENV182640743
OJLD01000283
412586
Actinomycetota
CCC
Gly
>WENV182640732
OJLD01000158
235609
Actinomycetota
CTT
Lys
>WENV182640794
OJLD01002700
285954
Actinomycetota
>WENV182640728
OJLD01000140
238649
Actinomycetota
TAC
Val
>WENV182640783
OJLD01001881
359306
Actinomycetota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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