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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183509411
OMHI01001413
287493
Actinomycetota
>WENV183509366
OMHI01000157
176353
Actinomycetota
CAA
Leu
>WENV183509454
OMHI01003348
399101
Actinomycetota
CAC
Val
>WENV183509532
OMHI01009645
74117
Actinomycetota
CAG
Leu
>WENV183509358
OMHI01000032
73081
Actinomycetota
CAG
Leu
>WENV183509541
OMHI01011004
399188
Actinomycetota
CAT
Met
>WENV183509463
OMHI01003811
180945
Actinomycetota
CAT
Met
>WENV183509542
OMHI01011004
287437
Actinomycetota
CCA
Trp
>WENV183509360
OMHI01000048
480521
Actinomycetota
CCC
Gly
>WENV183509382
OMHI01000499
280976
Actinomycetota
CCG
Arg
>WENV183509423
OMHI01001950
285876
Actinomycetota
CGT
Thr
>WENV183509428
OMHI01002210
287452
Actinomycetota
CGT
Thr
>WENV183509410
OMHI01001413
423546
Actinomycetota
CTG
Gln
>WENV183509546
OMHI01011261
434575
Actinomycetota
CTG
Gln
>WENV183509531
OMHI01009512
284890
Actinomycetota
CTT
Lys
>WENV183509370
OMHI01000233
287476
Actinomycetota
CTT
Lys
>WENV183509388
OMHI01000595
280986
Actinomycetota
GAA
Phe
>WENV183509416
OMHI01001535
434601
Actinomycetota
GAC
Val
>WENV183509528
OMHI01009368
47453
Actinomycetota
GAG
Leu
>WENV183509419
OMHI01001599
46668
Actinomycetota
GAG
Leu
>WENV183509563
OMHI01012464
20643
Actinomycetota
GAG
Leu
>WENV183509497
OMHI01006047
184156
Actinomycetota
GAT
Ile
>WENV183509355
OMHI01000021
176317
Actinomycetota
GAT
Ile
>WENV183509415
OMHI01001535
480461
Actinomycetota
GCA
Cys
>WENV183509438
OMHI01002572
284887
Actinomycetota
GCC
Gly
>WENV183509362
OMHI01000086
47028
Actinomycetota
GGA
Ser
>WENV183509521
OMHI01008191
371116
Actinomycetota
GGC
Ala
>WENV183509392
OMHI01000736
184493
Actinomycetota
GGG
Pro
>WENV183509540
OMHI01011004
280979
Actinomycetota
GGT
Thr
>WENV183509461
OMHI01003811
131892
Actinomycetota
GTA
Tyr
>WENV183509488
OMHI01005340
180944
Actinomycetota
GTC
Asp
>WENV183509377
OMHI01000316
179433
Actinomycetota
TAA
Leu
>WENV183509379
OMHI01000407
402794
Actinomycetota
TCC
Gly
>WENV183509514
OMHI01007224
481756
Actinomycetota
TCC
Gly
>WENV183509515
OMHI01007296
482894
Actinomycetota
TCC
Gly
>WENV183509535
OMHI01010071
46947
Actinomycetota
TGA
Ser
>WENV183509574
OMHI01014533
351841
Actinomycetota
TGC
Ala
>WENV183509356
OMHI01000021
312253
Actinomycetota
TGC
Ala
>WENV183509395
OMHI01000817
280983
Actinomycetota
TGT
Thr
>WENV183509471
OMHI01004569
187640
Actinomycetota
TGT
Thr
>WENV183509367
OMHI01000204
280985
Actinomycetota
TTC
Glu
>WENV183509519
OMHI01007868
180946
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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