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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1015320
SRR023846.15388
400062
Actinomycetota
CAC
Val
>SRA1015560
SRR023846.111623
236563
Actinomycetota
CGG
Pro
>SRA1016552
SRR023846.560909
178359
Actinomycetota
CGG
Pro
>SRA1016118
SRR023846.354320
178359
Actinomycetota
CGG
Pro
>SRA1015990
SRR023846.295660
178359
Actinomycetota
CGG
Pro
>SRA1015909
SRR023846.254414
178359
Actinomycetota
CGG
Pro
>SRA1016342
SRR023846.459416
286628
Actinomycetota
GTG
His
>SRA1015805
SRR023846.206796
241114
Actinomycetota
CGG
Pro
>SRA1015783
SRR023846.198563
301037
Actinomycetota
CGC
Ala
>SRA1016163
SRR023846.376186
400291
Actinomycetota
CTG
Gln
>SRA1016500
SRR023846.533581
328762
Actinomycetota
CTT
Lys
>SRA1016045
SRR023846.322849
328762
Actinomycetota
CTT
Lys
>SRA1015421
SRR023846.51608
328762
Actinomycetota
CTT
Lys
>SRA1015886
SRR023846.241940
283404
Actinomycetota
GTT
Asn
>SRA1016460
SRR023846.508799
283059
Actinomycetota
GCC
Gly
>SRA1016464
SRR023846.511820
220273
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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