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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180214438
OBAP01001175
154227
Alphaproteobacteria
CAT
Met
>WENV180214439
OBAP01001230
113700
Alphaproteobacteria
>WENV180214450
OBAP01002072
348781
Alphaproteobacteria
GAA
Phe
>WENV180214453
OBAP01002180
344517
Alphaproteobacteria
GTT
Asn
>WENV180214472
OBAP01002841
267922
Alphaproteobacteria
CCA
Trp
>WENV180214506
OBAP01005389
252148
Alphaproteobacteria
TGT
Thr
>WENV180214518
OBAP01006747
147283
Alphaproteobacteria
GTG
His
>WENV180214551
OBAP01011926
113716
Alphaproteobacteria
CAA
Leu
>WENV180214558
OBAP01012293
338282
Alphaproteobacteria
GTT
Asn
>WENV180214580
OBAP01014419
341164
Alphaproteobacteria
GCC
Gly
>WENV180214585
OBAP01016293
23672
Alphaproteobacteria
GCT
Ser
>WENV180214591
OBAP01017187
354623
Alphaproteobacteria
GAC
Val
>WENV180214615
OBAP01020960
236256
Alphaproteobacteria
TAC
Val
>WENV180214662
OBAP01031288
148353
Alphaproteobacteria
CAT
Met
>WENV180214710
OBAP01047001
348781
Alphaproteobacteria
GAA
Phe
>WENV180214755
OBAP01064959
338282
Alphaproteobacteria
GTT
Asn
>WENV180214760
OBAP01068127
147879
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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