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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183512542
OMKS01000706
343545
Alphaproteobacteria
CAC
Val
>WENV183513091
OMKS01002682
23468
Alphaproteobacteria
GCT
Ser
>WENV183512445
OMKS01000488
23671
Alphaproteobacteria
CGA
Ser
>WENV183513025
OMKS01002413
338282
Alphaproteobacteria
GTT
Asn
>WENV183516152
OMKS01137905
340288
Alphaproteobacteria
GCC
Gly
>WENV183513488
OMKS01005435
419996
Alphaproteobacteria
GCA
Cys
>WENV183515741
OMKS01089531
419996
Alphaproteobacteria
GCA
Cys
>WENV183512625
OMKS01000922
237740
Alphaproteobacteria
TTT
Lys
>WENV183516285
OMKS01152862
236004
Alphaproteobacteria
TTT
Lys
>WENV183514506
OMKS01021205
161002
Alphaproteobacteria
GTG
His
>WENV183514330
OMKS01016299
148083
Alphaproteobacteria
ACG
Arg
>WENV183513096
OMKS01002705
59164
Alphaproteobacteria
GAG
Leu
>WENV183513746
OMKS01007593
163860
Alphaproteobacteria
GGG
Pro
>WENV183515808
OMKS01095137
338760
Alphaproteobacteria
GAA
Phe
>WENV183512904
OMKS01001770
338760
Alphaproteobacteria
GAA
Phe
>WENV183512903
OMKS01001770
352191
Alphaproteobacteria
GGT
Thr
>WENV183515964
OMKS01112539
145689
Alphaproteobacteria
CCT
Arg
>WENV183514781
OMKS01031556
145689
Alphaproteobacteria
CCT
Arg
>WENV183513574
OMKS01005999
145689
Alphaproteobacteria
CCT
Arg
>WENV183515961
OMKS01112409
339606
Alphaproteobacteria
>WENV183513477
OMKS01005320
339606
Alphaproteobacteria
>WENV183513433
OMKS01004891
342846
Alphaproteobacteria
GAC
Val
>WENV183516399
OMKS01173297
113767
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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