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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183697044
OUNJ010001279
96238
Alphaproteobacteria
GAG
Leu
>WENV183697054
OUNJ010001540
96238
Alphaproteobacteria
GAG
Leu
>WENV183697062
OUNJ010001657
96238
Alphaproteobacteria
GAG
Leu
>WENV183697359
OUNJ010510270
96238
Alphaproteobacteria
GAG
Leu
>WENV183697376
OUNJ010575254
96238
Alphaproteobacteria
GAG
Leu
>WENV183697457
OUNJ010979481
96238
Alphaproteobacteria
GAG
Leu
>WENV183697214
OUNJ010078674
235844
Alphaproteobacteria
CGC
Ala
>WENV183697253
OUNJ010156400
159305
Alphaproteobacteria
GTC
Asp
>WENV183697023
OUNJ010000699
114616
Alphaproteobacteria
GTA
Tyr
>WENV183697314
OUNJ010342195
114616
Alphaproteobacteria
GTA
Tyr
>WENV183696985
OUNJ010000080
166353
Alphaproteobacteria
ACG
Arg
>WENV183697190
OUNJ010051748
166353
Alphaproteobacteria
ACG
Arg
>WENV183697207
OUNJ010075373
166353
Alphaproteobacteria
ACG
Arg
>WENV183697113
OUNJ010003977
175748
Alphaproteobacteria
CAT
Met
>WENV183697360
OUNJ010519404
146818
Alphaproteobacteria
CAT
Met
>WENV183697332
OUNJ010401952
146818
Alphaproteobacteria
CAT
Met
>WENV183696979
OUNJ010000039
146818
Alphaproteobacteria
CAT
Met
>WENV183697383
OUNJ010593669
244489
Alphaproteobacteria
CTT
Lys
>WENV183697336
OUNJ010435888
244489
Alphaproteobacteria
CTT
Lys
>WENV183697251
OUNJ010145175
244489
Alphaproteobacteria
CTT
Lys
>WENV183697007
OUNJ010000472
244489
Alphaproteobacteria
CTT
Lys
>WENV183697461
OUNJ011000459
59118
Alphaproteobacteria
CAG
Leu
>WENV183697395
OUNJ010640870
59118
Alphaproteobacteria
CAG
Leu
>WENV183697223
OUNJ010092258
59118
Alphaproteobacteria
CAG
Leu
>WENV183697110
OUNJ010003584
59118
Alphaproteobacteria
CAG
Leu
>WENV183697117
OUNJ010007149
253273
Alphaproteobacteria
CTT
Lys
>WENV183697310
OUNJ010336899
97145
Alphaproteobacteria
TAG
Leu
>WENV183696999
OUNJ010000313
364533
Alphaproteobacteria
GCC
Gly
>WENV183697315
OUNJ010342195
424918
Alphaproteobacteria
TCC
Gly
>WENV183697024
OUNJ010000699
424918
Alphaproteobacteria
TCC
Gly
>WENV183697276
OUNJ010244662
153233
Alphaproteobacteria
GAT
Ile
>WENV183697209
OUNJ010078027
413302
Alphaproteobacteria
CCC
Gly
>WENV183697159
OUNJ010025394
413302
Alphaproteobacteria
CCC
Gly
>WENV183697111
OUNJ010003609
413302
Alphaproteobacteria
CCC
Gly
>WENV183697269
OUNJ010210557
147289
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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