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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09002949
ADGC01051143
510477
Bacillota
TCC
Gly
>ENV09002872
ADGC01038512
343590
Bacillota
GCC
Gly
>ENV09002592
ADGC01007329
234991
Bacillota
GAT
Ile
>ENV09002626
ADGC01009662
280500
Bacillota
TGC
Ala
>ENV09002898
ADGC01042805
280500
Bacillota
TGC
Ala
>ENV09002461
ADGC01002722
349107
Bacillota
GCC
Gly
>ENV09002513
ADGC01004022
112303
Bacillota
CAA
Leu
>ENV09002527
ADGC01004738
295166
Bacillota
TGC
Ala
>ENV09002589
ADGC01007328
295166
Bacillota
TGC
Ala
>ENV09002591
ADGC01007329
295166
Bacillota
TGC
Ala
>ENV09002935
ADGC01050027
203929
Bacillota
TCT
Arg
>ENV09002478
ADGC01002934
175825
Bacillota
GAT
Ile
>ENV09002486
ADGC01003232
175825
Bacillota
GAT
Ile
>ENV09002649
ADGC01011027
189473
Bacillota
GAT
Ile
>ENV09002506
ADGC01003519
332891
Bacillota
TGC
Ala
>ENV09002836
ADGC01032593
332891
Bacillota
TGC
Ala
>ENV09002421
ADGC01001665
398857
Bacillota
TTC
Glu
>ENV09002790
ADGC01028003
58120
Bacillota
AAG
Leu
>ENV09002950
ADGC01051143
184539
Bacillota
TCT
Arg
>ENV09002628
ADGC01009823
285601
Bacillota
TTC
Glu
>ENV09002544
ADGC01005161
280486
Bacillota
TGC
Ala
>ENV09002419
ADGC01001665
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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