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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV084491
BABA01000464
398854
Bacillota
CTC
Glu
>WENV084495
BABA01000477
280428
Bacillota
GAA
Phe
>WENV084496
BABA01000477
290325
Bacillota
GCC
Gly
>WENV084499
BABA01000640
280436
Bacillota
TGC
Ala
>WENV084518
BABA01001174
280486
Bacillota
TGC
Ala
>WENV084527
BABA01001352
290325
Bacillota
GCC
Gly
>WENV084529
BABA01001375
280500
Bacillota
TGC
Ala
>WENV084533
BABA01001556
175825
Bacillota
GAT
Ile
>WENV084534
BABA01001556
280436
Bacillota
TGC
Ala
>WENV084581
BABA01003544
175859
Bacillota
TCT
Arg
>WENV084615
BABA01004645
291581
Bacillota
CGG
Pro
>WENV084616
BABA01004645
480322
Bacillota
CTG
Gln
>WENV084629
BABA01005255
280486
Bacillota
TGC
Ala
>WENV084641
BABA01005664
290325
Bacillota
GCC
Gly
>WENV084664
BABA01006301
298260
Bacillota
GTT
Asn
>WENV084679
BABA01007204
280486
Bacillota
TGC
Ala
>WENV084680
BABA01007211
280486
Bacillota
TGC
Ala
>WENV084684
BABA01007439
175911
Bacillota
GTC
Asp
>WENV084700
BABA01008965
450453
Bacillota
CTC
Glu
>WENV084707
BABA01009732
323864
Bacillota
TGC
Ala
>WENV084716
BABA01009983
175831
Bacillota
ACG
Arg
>WENV084719
BABA01010213
190476
Bacillota
CAT
Met
>WENV084720
BABA01010213
398832
Bacillota
TTC
Glu
>WENV084731
BABA01010552
179166
Bacillota
TCT
Arg
>WENV084756
BABA01012397
280447
Bacillota
GAC
Val
>WENV084768
BABA01013162
73009
Bacillota
CAG
Leu
>WENV084785
BABA01014237
190476
Bacillota
CAT
Met
>WENV084786
BABA01014237
398832
Bacillota
TTC
Glu
>WENV084788
BABA01014476
175825
Bacillota
GAT
Ile
>WENV084789
BABA01014476
280436
Bacillota
TGC
Ala
>WENV084795
BABA01014894
290325
Bacillota
GCC
Gly
>WENV084805
BABA01015513
444314
Bacillota
GTT
Asn
>WENV084816
BABA01016498
291597
Bacillota
TGC
Ala
>WENV084831
BABA01018893
73009
Bacillota
CAG
Leu
>WENV084880
BABA01026912
332891
Bacillota
TGC
Ala
>WENV084886
BABA01027705
295350
Bacillota
TGC
Ala
>WENV084891
BABA01028213
280483
Bacillota
GAA
Phe
>WENV084892
BABA01028245
189473
Bacillota
GAT
Ile
>WENV084899
BABA01028899
215243
Bacillota
CAT
Met
>WENV084904
BABA01029348
280444
Bacillota
GGT
Thr
>WENV084926
BABA01031746
497729
Bacillota
CCA
Trp
>WENV084932
BABA01033067
280447
Bacillota
GAC
Val
>WENV084939
BABA01034535
284723
Bacillota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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