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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170059665
CDZH01056028
73664
Bacillota
CAG
Leu
>WENV170059216
CDZH01038473
73009
Bacillota
CAG
Leu
>WENV170058725
CDZH01021444
179917
Bacillota
CAT
Met
>WENV170058995
CDZH01030101
179917
Bacillota
CAT
Met
>WENV170059978
CDZH01069148
179917
Bacillota
CAT
Met
>WENV170059607
CDZH01054709
497729
Bacillota
CCA
Trp
>WENV170059924
CDZH01066641
483485
Bacillota
CCC
Gly
>WENV170059317
CDZH01042775
480322
Bacillota
CTG
Gln
>WENV170059200
CDZH01037924
291634
Bacillota
GAA
Phe
>WENV170058759
CDZH01022700
280483
Bacillota
GAA
Phe
>WENV170058763
CDZH01022700
280483
Bacillota
GAA
Phe
>WENV170058843
CDZH01025319
280483
Bacillota
GAA
Phe
>WENV170059585
CDZH01053936
280447
Bacillota
GAC
Val
>WENV170059962
CDZH01068540
234991
Bacillota
GAT
Ile
>WENV170058648
CDZH01018610
179563
Bacillota
GAT
Ile
>WENV170058619
CDZH01017284
189473
Bacillota
GAT
Ile
>WENV170060071
CDZH01073140
189473
Bacillota
GAT
Ile
>WENV170060293
CDZH01082673
186051
Bacillota
GAT
Ile
>WENV170058221
CDZH01000734
223045
Bacillota
GAT
Ile
>WENV170059942
CDZH01067387
343590
Bacillota
GCC
Gly
>WENV170060206
CDZH01079047
343590
Bacillota
GCC
Gly
>WENV170059305
CDZH01042342
290325
Bacillota
GCC
Gly
>WENV170059073
CDZH01032743
444984
Bacillota
GCC
Gly
>WENV170058351
CDZH01005342
285756
Bacillota
GCC
Gly
>WENV170058760
CDZH01022700
285756
Bacillota
GCC
Gly
>WENV170058764
CDZH01022700
285756
Bacillota
GCC
Gly
>WENV170058560
CDZH01014678
405393
Bacillota
GCC
Gly
>WENV170059411
CDZH01046836
405393
Bacillota
GCC
Gly
>WENV170058319
CDZH01004208
27216
Bacillota
GCT
Ser
>WENV170059027
CDZH01030860
280444
Bacillota
GGT
Thr
>WENV170059489
CDZH01049452
289123
Bacillota
GGT
Thr
>WENV170059533
CDZH01050836
289123
Bacillota
GGT
Thr
>WENV170058395
CDZH01006646
118669
Bacillota
GTA
Tyr
>WENV170059704
CDZH01057993
186123
Bacillota
GTC
Asp
>WENV170058212
CDZH01000712
229015
Bacillota
GTG
His
>WENV170058857
CDZH01025663
229015
Bacillota
GTG
His
>WENV170059141
CDZH01035931
280427
Bacillota
TAC
Val
>WENV170058785
CDZH01023824
284723
Bacillota
TAC
Val
>WENV170058992
CDZH01030101
284723
Bacillota
TAC
Val
>WENV170059975
CDZH01069148
284723
Bacillota
TAC
Val
>WENV170060109
CDZH01074532
284723
Bacillota
TAC
Val
>WENV170059052
CDZH01032160
317482
Bacillota
TAC
Val
>WENV170059420
CDZH01047317
317482
Bacillota
TAC
Val
>WENV170059709
CDZH01058519
342104
Bacillota
TAC
Val
>WENV170059775
CDZH01060818
342104
Bacillota
TAC
Val
>WENV170058494
CDZH01011277
510477
Bacillota
TCC
Gly
>WENV170060119
CDZH01075189
175859
Bacillota
TCT
Arg
>WENV170058856
CDZH01025663
179810
Bacillota
TCT
Arg
>WENV170058495
CDZH01011277
184539
Bacillota
TCT
Arg
>WENV170058769
CDZH01023263
280500
Bacillota
TGC
Ala
>WENV170059961
CDZH01068540
295166
Bacillota
TGC
Ala
>WENV170058647
CDZH01018610
353153
Bacillota
TGC
Ala
>WENV170058334
CDZH01004677
356775
Bacillota
TGT
Thr
>WENV170058844
CDZH01025320
303718
Bacillota
TGT
Thr
>WENV170059897
CDZH01065561
303718
Bacillota
TGT
Thr
>WENV170059986
CDZH01069774
303718
Bacillota
TGT
Thr
>WENV170060194
CDZH01078062
303718
Bacillota
TGT
Thr
>WENV170059041
CDZH01031503
455259
Bacillota
TTC
Glu
>WENV170059029
CDZH01030862
398832
Bacillota
TTC
Glu
>WENV170059034
CDZH01031475
346451
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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