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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170060386
CDZI01002752
398832
Bacillota
TTC
Glu
>WENV170060412
CDZI01003390
455259
Bacillota
TTC
Glu
>WENV170060540
CDZI01007595
303718
Bacillota
TGT
Thr
>WENV170060563
CDZI01008258
179917
Bacillota
CAT
Met
>WENV170060560
CDZI01008258
284723
Bacillota
TAC
Val
>WENV170060566
CDZI01008786
175831
Bacillota
ACG
Arg
>WENV170060581
CDZI01009363
342104
Bacillota
TAC
Val
>WENV170060664
CDZI01013173
229015
Bacillota
GTG
His
>WENV170060663
CDZI01013173
179810
Bacillota
TCT
Arg
>WENV170060679
CDZI01014023
190476
Bacillota
CAT
Met
>WENV170060720
CDZI01015295
175825
Bacillota
GAT
Ile
>WENV170060719
CDZI01015295
280436
Bacillota
TGC
Ala
>WENV170060732
CDZI01015757
405393
Bacillota
GCC
Gly
>WENV170060752
CDZI01017103
497729
Bacillota
CCA
Trp
>WENV170060781
CDZI01018988
510477
Bacillota
TCC
Gly
>WENV170060886
CDZI01024763
298260
Bacillota
GTT
Asn
>WENV170060934
CDZI01026431
280436
Bacillota
TGC
Ala
>WENV170060962
CDZI01027131
398832
Bacillota
TTC
Glu
>WENV170061003
CDZI01030065
480324
Bacillota
TTG
Gln
>WENV170061063
CDZI01032642
280444
Bacillota
GGT
Thr
>WENV170061068
CDZI01032706
303718
Bacillota
TGT
Thr
>WENV170061182
CDZI01037447
179563
Bacillota
GAT
Ile
>WENV170061181
CDZI01037447
353153
Bacillota
TGC
Ala
>WENV170061187
CDZI01037805
480322
Bacillota
CTG
Gln
>WENV170061196
CDZI01038510
480322
Bacillota
CTG
Gln
>WENV170061197
CDZI01038524
280447
Bacillota
GAC
Val
>WENV170061214
CDZI01039173
175868
Bacillota
GTT
Asn
>WENV170061251
CDZI01040702
398854
Bacillota
CTC
Glu
>WENV170061263
CDZI01040919
223045
Bacillota
GAT
Ile
>WENV170061400
CDZI01047245
175825
Bacillota
GAT
Ile
>WENV170061437
CDZI01049480
480322
Bacillota
CTG
Gln
>WENV170061479
CDZI01051031
480322
Bacillota
CTG
Gln
>WENV170061549
CDZI01055115
398833
Bacillota
TGT
Thr
>WENV170061572
CDZI01055779
179563
Bacillota
GAT
Ile
>WENV170061571
CDZI01055779
353153
Bacillota
TGC
Ala
>WENV170061587
CDZI01056316
280500
Bacillota
TGC
Ala
>WENV170061659
CDZI01058566
291576
Bacillota
CCC
Gly
>WENV170061735
CDZI01061633
186051
Bacillota
GAT
Ile
>WENV170061838
CDZI01066595
284723
Bacillota
TAC
Val
>WENV170061839
CDZI01066765
349107
Bacillota
GCC
Gly
>WENV170061935
CDZI01071046
179563
Bacillota
GAT
Ile
>WENV170061934
CDZI01071046
353153
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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