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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180312859
OBJZ01000604
184537
Bacillota
ACG
Arg
>WENV180312773
OBJZ01000070
408526
Bacillota
GCA
Cys
>WENV180312559
OBJZ01000004
291579
Bacillota
GAA
Phe
>WENV180312852
OBJZ01000470
296855
Bacillota
GGT
Thr
>WENV180312813
OBJZ01000165
48505
Bacillota
TGA
Ser
>WENV180312794
OBJZ01000102
289717
Bacillota
CTT
Lys
>WENV180312812
OBJZ01000162
20932
Bacillota
GCT
Ser
>WENV180312771
OBJZ01000070
291553
Bacillota
GAA
Phe
>WENV180312785
OBJZ01000084
291553
Bacillota
GAA
Phe
>WENV180312997
OBJZ01018231
291553
Bacillota
GAA
Phe
>WENV180312964
OBJZ01006635
481167
Bacillota
GCA
Cys
>WENV180312845
OBJZ01000404
482593
Bacillota
CCC
Gly
>WENV180312817
OBJZ01000171
20942
Bacillota
GGA
Ser
>WENV180312642
OBJZ01000023
182299
Bacillota
CAT
Met
>WENV180312823
OBJZ01000205
182299
Bacillota
CAT
Met
>WENV180312853
OBJZ01000470
184495
Bacillota
CAT
Met
>WENV180312839
OBJZ01000334
141202
Bacillota
CAA
Leu
>WENV180312849
OBJZ01000470
289713
Bacillota
TGT
Thr
>WENV180312832
OBJZ01000251
404091
Bacillota
TTG
Gln
>WENV180312831
OBJZ01000251
289716
Bacillota
GTG
His
>WENV180312967
OBJZ01006994
178972
Bacillota
TCT
Arg
>WENV180312800
OBJZ01000115
480337
Bacillota
TCC
Gly
>WENV180312811
OBJZ01000149
119459
Bacillota
TAG
Leu
>WENV180312986
OBJZ01015184
104114
Bacillota
CAG
Leu
>WENV180312966
OBJZ01006781
20461
Bacillota
GGA
Ser
>WENV180312989
OBJZ01015331
73616
Bacillota
CAA
Leu
>WENV180312770
OBJZ01000070
280547
Bacillota
GTC
Asp
>WENV180312784
OBJZ01000084
280547
Bacillota
GTC
Asp
>WENV180312833
OBJZ01000251
289761
Bacillota
TTT
Lys
>WENV180312641
OBJZ01000023
401835
Bacillota
GCA
Cys
>WENV180312960
OBJZ01004553
46821
Bacillota
TAA
Leu
>WENV180312729
OBJZ01000058
320075
Bacillota
GAA
Phe
>WENV180312835
OBJZ01000276
289715
Bacillota
TAC
Val
>WENV180312802
OBJZ01000115
20943
Bacillota
CGA
Ser
>WENV180312552
OBJZ01000004
482441
Bacillota
TCC
Gly
>WENV180312634
OBJZ01000021
482441
Bacillota
TCC
Gly
>WENV180312758
OBJZ01000066
482441
Bacillota
TCC
Gly
>WENV180312799
OBJZ01000115
208539
Bacillota
TGG
Pro
>WENV180312801
OBJZ01000115
184539
Bacillota
TCT
Arg
>WENV180312988
OBJZ01015288
47133
Bacillota
AAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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