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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180471138
OBYP01000035
184687
Bacillota
CAT
Met
>WENV180471137
OBYP01000035
284723
Bacillota
TAC
Val
>WENV180471142
OBYP01000037
321248
Bacillota
TAC
Val
>WENV180471144
OBYP01000037
321248
Bacillota
TAC
Val
>WENV180471167
OBYP01000048
187364
Bacillota
CAT
Met
>WENV180471166
OBYP01000048
321248
Bacillota
TAC
Val
>WENV180471175
OBYP01000054
184497
Bacillota
GGG
Pro
>WENV180471181
OBYP01000059
48505
Bacillota
TGA
Ser
>WENV180471195
OBYP01000065
408526
Bacillota
GCA
Cys
>WENV180471193
OBYP01000065
291553
Bacillota
GAA
Phe
>WENV180471192
OBYP01000065
280547
Bacillota
GTC
Asp
>WENV180471204
OBYP01000067
179176
Bacillota
ACG
Arg
>WENV180471202
OBYP01000067
284723
Bacillota
TAC
Val
>WENV180471198
OBYP01000067
398857
Bacillota
TTC
Glu
>WENV180471203
OBYP01000067
46835
Bacillota
TAA
Leu
>WENV180471201
OBYP01000067
175915
Bacillota
GTC
Asp
>WENV180471241
OBYP01000112
280708
Bacillota
TAC
Val
>WENV180471255
OBYP01000124
398835
Bacillota
GCC
Gly
>WENV180471262
OBYP01000138
141202
Bacillota
CAA
Leu
>WENV180471263
OBYP01000140
20932
Bacillota
GCT
Ser
>WENV180471270
OBYP01000150
432453
Bacillota
TTC
Glu
>WENV180471268
OBYP01000150
333281
Bacillota
GTT
Asn
>WENV180471269
OBYP01000150
289761
Bacillota
TTT
Lys
>WENV180471271
OBYP01000150
289715
Bacillota
TAC
Val
>WENV180471299
OBYP01000182
46835
Bacillota
TAA
Leu
>WENV180471326
OBYP01000201
284723
Bacillota
TAC
Val
>WENV180471367
OBYP01000287
73638
Bacillota
AAG
Leu
>WENV180471370
OBYP01000289
480337
Bacillota
TCC
Gly
>WENV180471369
OBYP01000289
208539
Bacillota
TGG
Pro
>WENV180471371
OBYP01000289
184539
Bacillota
TCT
Arg
>WENV180471383
OBYP01000315
289717
Bacillota
CTT
Lys
>WENV180471401
OBYP01000343
398835
Bacillota
GCC
Gly
>WENV180471427
OBYP01000405
20942
Bacillota
GGA
Ser
>WENV180471436
OBYP01000433
291553
Bacillota
GAA
Phe
>WENV180471435
OBYP01000433
280547
Bacillota
GTC
Asp
>WENV180471442
OBYP01000440
20943
Bacillota
CGA
Ser
>WENV180471486
OBYP01000541
482593
Bacillota
CCC
Gly
>WENV180471490
OBYP01000557
184537
Bacillota
ACG
Arg
>WENV180471491
OBYP01000557
119459
Bacillota
TAG
Leu
>WENV180471523
OBYP01000657
280476
Bacillota
TTT
Lys
>WENV180471548
OBYP01000735
404091
Bacillota
TTG
Gln
>WENV180471547
OBYP01000735
289716
Bacillota
GTG
His
>WENV180471549
OBYP01000735
289761
Bacillota
TTT
Lys
>WENV180471552
OBYP01000762
285601
Bacillota
TTC
Glu
>WENV180471556
OBYP01000785
398835
Bacillota
GCC
Gly
>WENV180471567
OBYP01000807
204381
Bacillota
GAT
Ile
>WENV180471575
OBYP01000837
321248
Bacillota
TAC
Val
>WENV180471578
OBYP01000839
291579
Bacillota
GAA
Phe
>WENV180471602
OBYP01000942
291579
Bacillota
GAA
Phe
>WENV180471603
OBYP01000942
280476
Bacillota
TTT
Lys
>WENV180471606
OBYP01000949
321248
Bacillota
TAC
Val
>WENV180471616
OBYP01000960
296855
Bacillota
GGT
Thr
>WENV180471617
OBYP01000960
184495
Bacillota
CAT
Met
>WENV180471613
OBYP01000960
289713
Bacillota
TGT
Thr
>WENV180471620
OBYP01000960
432453
Bacillota
TTC
Glu
>WENV180471618
OBYP01000960
333281
Bacillota
GTT
Asn
>WENV180471619
OBYP01000960
289761
Bacillota
TTT
Lys
>WENV180471621
OBYP01000960
289715
Bacillota
TAC
Val
>WENV180471631
OBYP01001033
285601
Bacillota
TTC
Glu
>WENV180471644
OBYP01001073
228119
Bacillota
TCT
Arg
>WENV180471652
OBYP01001095
175915
Bacillota
GTC
Asp
>WENV180471679
OBYP01001216
175857
Bacillota
GTG
His
>WENV180471693
OBYP01001258
175911
Bacillota
GTC
Asp
>WENV180471710
OBYP01001368
280476
Bacillota
TTT
Lys
>WENV180471707
OBYP01001368
179166
Bacillota
TCT
Arg
>WENV180471726
OBYP01001449
398835
Bacillota
GCC
Gly
>WENV180471749
OBYP01001712
179917
Bacillota
CAT
Met
>WENV180471764
OBYP01002004
73638
Bacillota
AAG
Leu
>WENV180471784
OBYP01002550
221826
Bacillota
ACG
Arg
>WENV180471793
OBYP01002881
292374
Bacillota
TGC
Ala
>WENV180471792
OBYP01002881
201856
Bacillota
GAT
Ile
>WENV180471809
OBYP01003817
280486
Bacillota
TGC
Ala
>WENV180471813
OBYP01004037
195824
Bacillota
GAT
Ile
>WENV180471823
OBYP01004555
481217
Bacillota
GCA
Cys
>WENV180471831
OBYP01004658
332651
Bacillota
GTT
Asn
>WENV180471837
OBYP01005571
398835
Bacillota
GCC
Gly
>WENV180471851
OBYP01007199
284723
Bacillota
TAC
Val
>WENV180471860
OBYP01008689
215243
Bacillota
CAT
Met
>WENV180471872
OBYP01010301
295166
Bacillota
TGC
Ala
>WENV180471875
OBYP01010418
317820
Bacillota
TAC
Val
>WENV180471886
OBYP01011441
127792
Bacillota
TAG
Leu
>WENV180471900
OBYP01014671
280486
Bacillota
TGC
Ala
>WENV180471902
OBYP01015099
280486
Bacillota
TGC
Ala
>WENV180471905
OBYP01016160
291597
Bacillota
TGC
Ala
>WENV180471919
OBYP01017836
200563
Bacillota
TGG
Pro
>WENV180471926
OBYP01019281
287280
Bacillota
TGT
Thr
>WENV180471935
OBYP01022763
180688
Bacillota
GTC
Asp
>WENV180471953
OBYP01025614
323864
Bacillota
TGC
Ala
>WENV180471964
OBYP01033076
332651
Bacillota
GTT
Asn
>WENV180471968
OBYP01034161
416763
Bacillota
CTC
Glu
>WENV180471975
OBYP01037270
285556
Bacillota
TGT
Thr
>WENV180471977
OBYP01037616
176014
Bacillota
TCT
Arg
>WENV180471989
OBYP01048826
118359
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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