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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180597483
OCPL01002225
176016
Bacillota
CAT
Met
>WENV180597526
OCPL01004107
280492
Bacillota
CTT
Lys
>WENV180597560
OCPL01006473
398854
Bacillota
CTC
Glu
>WENV180597561
OCPL01006473
322848
Bacillota
CTT
Lys
>WENV180597648
OCPL01014350
73009
Bacillota
CAG
Leu
>WENV180597658
OCPL01015922
398852
Bacillota
CTC
Glu
>WENV180597683
OCPL01019578
280428
Bacillota
GAA
Phe
>WENV180597708
OCPL01022362
175831
Bacillota
ACG
Arg
>WENV180597720
OCPL01025500
175899
Bacillota
GTC
Asp
>WENV180597721
OCPL01025627
284506
Bacillota
CCA
Trp
>WENV180597723
OCPL01026227
285756
Bacillota
GCC
Gly
>WENV180597808
OCPL01048829
203851
Bacillota
TCT
Arg
>WENV180597825
OCPL01054100
295166
Bacillota
TGC
Ala
>WENV180597830
OCPL01057319
175849
Bacillota
GTC
Asp
>WENV180597831
OCPL01057319
280444
Bacillota
GGT
Thr
>WENV180597845
OCPL01061250
280436
Bacillota
TGC
Ala
>WENV180597846
OCPL01061250
175825
Bacillota
GAT
Ile
>WENV180597847
OCPL01061267
175859
Bacillota
TCT
Arg
>WENV180597862
OCPL01067148
280447
Bacillota
GAC
Val
>WENV180597893
OCPL01078102
284723
Bacillota
TAC
Val
>WENV180597946
OCPL01099671
56079
Bacillota
AAG
Leu
>WENV180597967
OCPL01106066
317820
Bacillota
TAC
Val
>WENV180597970
OCPL01107600
190476
Bacillota
CAT
Met
>WENV180597982
OCPL01112353
200471
Bacillota
ACG
Arg
>WENV180598016
OCPL01131348
46643
Bacillota
TGA
Ser
>WENV180598050
OCPL01154079
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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