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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180773265
ODIJ01000006
114002
Bacillota
CAA
Leu
>WENV180773341
ODIJ01000056
342895
Bacillota
CAT
Met
>WENV180773495
ODIJ01000368
157838
Bacillota
GTC
Asp
>WENV180773560
ODIJ01000586
16834
Bacillota
GCT
Ser
>WENV180773576
ODIJ01000644
151836
Bacillota
TCT
Arg
>WENV180773647
ODIJ01000968
148057
Bacillota
CAT
Met
>WENV180773652
ODIJ01000968
242848
Bacillota
GAA
Phe
>WENV180773654
ODIJ01000968
113951
Bacillota
GTA
Tyr
>WENV180773685
ODIJ01001259
235197
Bacillota
GTC
Asp
>WENV180773686
ODIJ01001259
250349
Bacillota
GAA
Phe
>WENV180773689
ODIJ01001259
37437
Bacillota
TAA
Leu
>WENV180773813
ODIJ01002549
113951
Bacillota
GTA
Tyr
>WENV180773815
ODIJ01002549
256920
Bacillota
TTT
Lys
>WENV180774078
ODIJ01007635
154711
Bacillota
TGG
Pro
>WENV180774137
ODIJ01009787
37213
Bacillota
TGA
Ser
>WENV180774197
ODIJ01012092
235150
Bacillota
TGC
Ala
>WENV180774217
ODIJ01012728
155040
Bacillota
GAT
Ile
>WENV180774223
ODIJ01013085
338676
Bacillota
CCG
Arg
>WENV180774236
ODIJ01013688
16834
Bacillota
GCT
Ser
>WENV180774266
ODIJ01015037
144762
Bacillota
TCT
Arg
>WENV180774272
ODIJ01015162
148495
Bacillota
TCT
Arg
>WENV180774293
ODIJ01015930
37551
Bacillota
CGA
Ser
>WENV180774296
ODIJ01016175
148268
Bacillota
CGG
Pro
>WENV180774306
ODIJ01016656
235693
Bacillota
GGT
Thr
>WENV180774307
ODIJ01016656
152491
Bacillota
CAT
Met
>WENV180774311
ODIJ01016943
152046
Bacillota
TCT
Arg
>WENV180774319
ODIJ01017504
243119
Bacillota
CTT
Lys
>WENV180774358
ODIJ01019271
235693
Bacillota
GGT
Thr
>WENV180774359
ODIJ01019271
152045
Bacillota
CAT
Met
>WENV180774398
ODIJ01021349
246392
Bacillota
GTT
Asn
>WENV180774400
ODIJ01021349
241761
Bacillota
TAC
Val
>WENV180774403
ODIJ01021516
413657
Bacillota
CCC
Gly
>WENV180774417
ODIJ01022635
340265
Bacillota
GCC
Gly
>WENV180774422
ODIJ01022780
411591
Bacillota
GGT
Thr
>WENV180774424
ODIJ01022956
243613
Bacillota
GTG
His
>WENV180774425
ODIJ01022956
343027
Bacillota
TTG
Gln
>WENV180774426
ODIJ01022956
243647
Bacillota
TTT
Lys
>WENV180774434
ODIJ01024149
162003
Bacillota
GTC
Asp
>WENV180774435
ODIJ01024149
347453
Bacillota
TGT
Thr
>WENV180774437
ODIJ01024149
114359
Bacillota
TAG
Leu
>WENV180774441
ODIJ01024149
144766
Bacillota
CAT
Met
>WENV180774443
ODIJ01024149
411585
Bacillota
GCA
Cys
>WENV180774448
ODIJ01024376
243612
Bacillota
TAC
Val
>WENV180774481
ODIJ01026951
237846
Bacillota
GCC
Gly
>WENV180774506
ODIJ01028214
155089
Bacillota
CAT
Met
>WENV180774561
ODIJ01034043
235137
Bacillota
TGC
Ala
>WENV180774567
ODIJ01034810
238853
Bacillota
TAC
Val
>WENV180774577
ODIJ01035779
37549
Bacillota
TAA
Leu
>WENV180774582
ODIJ01037324
239080
Bacillota
CTG
Gln
>WENV180774601
ODIJ01040316
243646
Bacillota
GTT
Asn
>WENV180774624
ODIJ01044726
241471
Bacillota
TGC
Ala
>WENV180774627
ODIJ01045748
241471
Bacillota
TGC
Ala
>WENV180774628
ODIJ01045845
152019
Bacillota
GAT
Ile
>WENV180774650
ODIJ01047706
241471
Bacillota
TGC
Ala
>WENV180774653
ODIJ01047862
241471
Bacillota
TGC
Ala
>WENV180774676
ODIJ01050354
339630
Bacillota
GCC
Gly
>WENV180774683
ODIJ01050356
243399
Bacillota
CCA
Trp
>WENV180774684
ODIJ01050356
152051
Bacillota
ACG
Arg
>WENV180774687
ODIJ01051662
241526
Bacillota
CTT
Lys
>WENV180774702
ODIJ01057722
16842
Bacillota
CGA
Ser
>WENV180774716
ODIJ01060602
147135
Bacillota
ACG
Arg
>WENV180774735
ODIJ01063017
154711
Bacillota
TGG
Pro
>WENV180774740
ODIJ01063744
81598
Bacillota
CAG
Leu
>WENV180774741
ODIJ01063744
81382
Bacillota
GAG
Leu
>WENV180774750
ODIJ01065608
235137
Bacillota
TGC
Ala
>WENV180774756
ODIJ01068043
241471
Bacillota
TGC
Ala
>WENV180774764
ODIJ01070560
144962
Bacillota
CAT
Met
>WENV180774765
ODIJ01070560
163753
Bacillota
TGG
Pro
>WENV180774767
ODIJ01070560
411585
Bacillota
GCA
Cys
>WENV180774789
ODIJ01075390
148348
Bacillota
GTC
Asp
>WENV180774831
ODIJ01085492
241471
Bacillota
TGC
Ala
>WENV180774849
ODIJ01088877
235701
Bacillota
TTT
Lys
>WENV180774856
ODIJ01093055
235137
Bacillota
TGC
Ala
>WENV180774893
ODIJ01106194
235137
Bacillota
TGC
Ala
>WENV180774982
ODIJ01148157
152047
Bacillota
GGG
Pro
>WENV180774988
ODIJ01152638
248683
Bacillota
TTT
Lys
>WENV180775016
ODIJ01165950
239079
Bacillota
TAC
Val
>WENV180775021
ODIJ01169338
243099
Bacillota
GTT
Asn
>WENV180775028
ODIJ01172917
243612
Bacillota
TAC
Val
>WENV180775038
ODIJ01177002
250349
Bacillota
GAA
Phe
>WENV180775046
ODIJ01179069
37213
Bacillota
TGA
Ser
>WENV180775063
ODIJ01186570
342730
Bacillota
CTC
Glu
>WENV180775071
ODIJ01197244
241638
Bacillota
GTG
His
>WENV180775085
ODIJ01212168
81373
Bacillota
GTA
Tyr
>WENV180775104
ODIJ01227217
243098
Bacillota
GGT
Thr
>WENV180775113
ODIJ01235486
238857
Bacillota
CCA
Trp
>WENV180775127
ODIJ01240234
144599
Bacillota
GTC
Asp
>WENV180775129
ODIJ01240870
238945
Bacillota
GCC
Gly
>WENV180775135
ODIJ01241685
16842
Bacillota
CGA
Ser
>WENV180775138
ODIJ01242819
235150
Bacillota
TGC
Ala
>WENV180775140
ODIJ01243240
147183
Bacillota
GTT
Asn
>WENV180775145
ODIJ01244241
243612
Bacillota
TAC
Val
>WENV180775150
ODIJ01246822
243647
Bacillota
TTT
Lys
>WENV180775151
ODIJ01246938
243647
Bacillota
TTT
Lys
>WENV180775156
ODIJ01247693
418445
Bacillota
TCC
Gly
>WENV180775158
ODIJ01247822
37437
Bacillota
TAA
Leu
>WENV180775159
ODIJ01248681
235197
Bacillota
GTC
Asp
>WENV180775162
ODIJ01249572
411591
Bacillota
GGT
Thr
>WENV180775163
ODIJ01250163
243646
Bacillota
GTT
Asn
>WENV180775189
ODIJ01260227
243646
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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