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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181679179
OGOS01000012
293599
Bacillota
CTT
Lys
>WENV181679191
OGOS01000023
147684
Bacillota
ACG
Arg
>WENV181679205
OGOS01000039
339890
Bacillota
TTG
Gln
>WENV181679249
OGOS01000093
152492
Bacillota
GGG
Pro
>WENV181679258
OGOS01000109
338147
Bacillota
CTC
Glu
>WENV181679257
OGOS01000109
338147
Bacillota
CTC
Glu
>WENV181679346
OGOS01000259
147684
Bacillota
ACG
Arg
>WENV181679396
OGOS01000445
287000
Bacillota
GTT
Asn
>WENV181679421
OGOS01000532
429429
Bacillota
CCA
Trp
>WENV181679426
OGOS01000546
243098
Bacillota
GGT
Thr
>WENV181679441
OGOS01000605
37269
Bacillota
TGA
Ser
>WENV181679443
OGOS01000606
338147
Bacillota
CTC
Glu
>WENV181679513
OGOS01000860
238974
Bacillota
GAA
Phe
>WENV181679533
OGOS01000919
152149
Bacillota
GTG
His
>WENV181679534
OGOS01000920
114075
Bacillota
TAG
Leu
>WENV181679535
OGOS01000921
196632
Bacillota
GTC
Asp
>WENV181679536
OGOS01000921
245344
Bacillota
GAA
Phe
>WENV181679545
OGOS01001002
338147
Bacillota
CTC
Glu
>WENV181679549
OGOS01001025
95563
Bacillota
GTA
Tyr
>WENV181679568
OGOS01001130
58712
Bacillota
CAG
Leu
>WENV181679572
OGOS01001146
338128
Bacillota
TTC
Glu
>WENV181679591
OGOS01001296
198770
Bacillota
GTC
Asp
>WENV181679618
OGOS01001506
411547
Bacillota
CTG
Gln
>WENV181679677
OGOS01002228
11034
Bacillota
GGA
Ser
>WENV181679680
OGOS01002276
235095
Bacillota
GGT
Thr
>WENV181679706
OGOS01002558
152492
Bacillota
GGG
Pro
>WENV181679724
OGOS01002876
152492
Bacillota
GGG
Pro
>WENV181679731
OGOS01002932
304022
Bacillota
GCC
Gly
>WENV181679734
OGOS01002963
178024
Bacillota
TCT
Arg
>WENV181679738
OGOS01003027
298620
Bacillota
CAT
Met
>WENV181679746
OGOS01003139
307003
Bacillota
TGC
Ala
>WENV181679752
OGOS01003261
58712
Bacillota
CAG
Leu
>WENV181679797
OGOS01003964
235294
Bacillota
TGC
Ala
>WENV181679801
OGOS01004033
263765
Bacillota
TAC
Val
>WENV181679800
OGOS01004033
353527
Bacillota
TTC
Glu
>WENV181679803
OGOS01004051
338128
Bacillota
TTC
Glu
>WENV181679805
OGOS01004088
338129
Bacillota
TGT
Thr
>WENV181679807
OGOS01004197
144612
Bacillota
TCT
Arg
>WENV181679810
OGOS01004248
412387
Bacillota
GCA
Cys
>WENV181679817
OGOS01004475
235098
Bacillota
GAC
Val
>WENV181679843
OGOS01005165
144668
Bacillota
GTC
Asp
>WENV181679865
OGOS01005608
338152
Bacillota
TTC
Glu
>WENV181679868
OGOS01005663
298639
Bacillota
GTT
Asn
>WENV181679886
OGOS01005875
44854
Bacillota
TGA
Ser
>WENV181679887
OGOS01005875
4624
Bacillota
GCT
Ser
>WENV181679915
OGOS01006722
245298
Bacillota
CGG
Pro
>WENV181679914
OGOS01006722
411547
Bacillota
CTG
Gln
>WENV181679916
OGOS01006793
163943
Bacillota
GTC
Asp
>WENV181679935
OGOS01007284
235124
Bacillota
TGG
Pro
>WENV181679952
OGOS01007684
119513
Bacillota
CAA
Leu
>WENV181679976
OGOS01008557
340802
Bacillota
TTG
Gln
>WENV181679975
OGOS01008557
144610
Bacillota
GTG
His
>WENV181679973
OGOS01008557
194150
Bacillota
TGG
Pro
>WENV181679985
OGOS01008927
411739
Bacillota
TCC
Gly
>WENV181679986
OGOS01008927
279635
Bacillota
GTG
His
>WENV181679998
OGOS01009015
338550
Bacillota
>WENV181679997
OGOS01009015
338550
Bacillota
>WENV181680044
OGOS01011073
113680
Bacillota
TAG
Leu
>WENV181680046
OGOS01011073
144762
Bacillota
TCT
Arg
>WENV181680059
OGOS01011944
235117
Bacillota
TAC
Val
>WENV181680066
OGOS01012251
299139
Bacillota
TGC
Ala
>WENV181680068
OGOS01012284
344240
Bacillota
GCC
Gly
>WENV181680097
OGOS01014010
97943
Bacillota
GTA
Tyr
>WENV181680104
OGOS01014306
429429
Bacillota
CCA
Trp
>WENV181680112
OGOS01014595
44859
Bacillota
AAG
Leu
>WENV181680119
OGOS01014771
235154
Bacillota
GTT
Asn
>WENV181680122
OGOS01014847
144594
Bacillota
CAC
Val
>WENV181680128
OGOS01015184
411549
Bacillota
TTG
Gln
>WENV181680129
OGOS01015230
148188
Bacillota
CCG
Arg
>WENV181680157
OGOS01017382
411547
Bacillota
CTG
Gln
>WENV181680169
OGOS01018023
338128
Bacillota
TTC
Glu
>WENV181680175
OGOS01018211
144621
Bacillota
GTT
Asn
>WENV181680210
OGOS01022392
429443
Bacillota
GCA
Cys
>WENV181680222
OGOS01023478
388249
Bacillota
GCA
Cys
>WENV181680291
OGOS01034391
162445
Bacillota
CAT
Met
>WENV181680302
OGOS01037120
80612
Bacillota
GTA
Tyr
>WENV181680311
OGOS01038026
235171
Bacillota
CCA
Trp
>WENV181680319
OGOS01040183
235150
Bacillota
TGC
Ala
>WENV181680320
OGOS01040263
144767
Bacillota
GTG
His
>WENV181680334
OGOS01043782
155958
Bacillota
GAT
Ile
>WENV181680345
OGOS01046166
155089
Bacillota
CAT
Met
>WENV181680359
OGOS01047300
116350
Bacillota
TAG
Leu
>WENV181680352
OGOS01047300
379268
Bacillota
TTC
Glu
>WENV181680357
OGOS01047300
380750
Bacillota
TGT
Thr
>WENV181680353
OGOS01047300
411584
Bacillota
TCC
Gly
>WENV181680356
OGOS01047300
235289
Bacillota
GTT
Asn
>WENV181680362
OGOS01047785
201704
Bacillota
GAT
Ile
>WENV181680365
OGOS01049498
241432
Bacillota
TGT
Thr
>WENV181680404
OGOS01058861
342895
Bacillota
CAT
Met
>WENV181680405
OGOS01059002
144583
Bacillota
ACG
Arg
>WENV181680415
OGOS01062303
59296
Bacillota
AAG
Leu
>WENV181680445
OGOS01073656
245296
Bacillota
CCC
Gly
>WENV181680458
OGOS01079817
413657
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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