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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182091874
OHHG01000033
235079
Bacillota
GAA
Phe
>WENV182091875
OHHG01000033
249259
Bacillota
GCC
Gly
>WENV182091885
OHHG01000050
235098
Bacillota
GAC
Val
>WENV182091898
OHHG01000075
411549
Bacillota
TTG
Gln
>WENV182091902
OHHG01000092
145382
Bacillota
GTC
Asp
>WENV182091903
OHHG01000092
356488
Bacillota
TGT
Thr
>WENV182091923
OHHG01000127
144612
Bacillota
TCT
Arg
>WENV182091933
OHHG01000153
235095
Bacillota
GGT
Thr
>WENV182091934
OHHG01000153
144594
Bacillota
CAC
Val
>WENV182091972
OHHG01000309
11034
Bacillota
GGA
Ser
>WENV182091990
OHHG01000420
144612
Bacillota
TCT
Arg
>WENV182091992
OHHG01000424
411547
Bacillota
CTG
Gln
>WENV182091993
OHHG01000424
245298
Bacillota
CGG
Pro
>WENV182091999
OHHG01000500
58712
Bacillota
CAG
Leu
>WENV182092008
OHHG01000516
235124
Bacillota
TGG
Pro
>WENV182092015
OHHG01000568
148188
Bacillota
CCG
Arg
>WENV182092023
OHHG01000645
338128
Bacillota
TTC
Glu
>WENV182092047
OHHG01000951
235124
Bacillota
TGG
Pro
>WENV182092070
OHHG01001268
148239
Bacillota
TCT
Arg
>WENV182092071
OHHG01001268
156937
Bacillota
GTG
His
>WENV182092077
OHHG01001283
11034
Bacillota
GGA
Ser
>WENV182092078
OHHG01001332
155273
Bacillota
CAT
Met
>WENV182092082
OHHG01001446
245296
Bacillota
CCC
Gly
>WENV182092087
OHHG01001575
169968
Bacillota
CAT
Met
>WENV182092088
OHHG01001575
272488
Bacillota
GAA
Phe
>WENV182092090
OHHG01001583
144583
Bacillota
ACG
Arg
>WENV182092093
OHHG01001656
235171
Bacillota
CCA
Trp
>WENV182092094
OHHG01001656
182792
Bacillota
GTC
Asp
>WENV182092095
OHHG01001656
235095
Bacillota
GGT
Thr
>WENV182092145
OHHG01003295
272488
Bacillota
GAA
Phe
>WENV182092148
OHHG01003303
273862
Bacillota
TGC
Ala
>WENV182092154
OHHG01003669
95563
Bacillota
GTA
Tyr
>WENV182092168
OHHG01004578
338129
Bacillota
TGT
Thr
>WENV182092169
OHHG01004598
148188
Bacillota
CCG
Arg
>WENV182092175
OHHG01004929
338128
Bacillota
TTC
Glu
>WENV182092178
OHHG01005008
338149
Bacillota
CTC
Glu
>WENV182092179
OHHG01005008
272992
Bacillota
CTT
Lys
>WENV182092186
OHHG01005589
235087
Bacillota
TGC
Ala
>WENV182092187
OHHG01005589
144577
Bacillota
GAT
Ile
>WENV182092207
OHHG01007592
44859
Bacillota
AAG
Leu
>WENV182092208
OHHG01007765
235150
Bacillota
TGC
Ala
>WENV182092210
OHHG01007765
247057
Bacillota
TGC
Ala
>WENV182092216
OHHG01008654
114075
Bacillota
TAG
Leu
>WENV182092217
OHHG01008662
80612
Bacillota
GTA
Tyr
>WENV182092237
OHHG01011617
247734
Bacillota
TGC
Ala
>WENV182092239
OHHG01011670
144621
Bacillota
GTT
Asn
>WENV182092252
OHHG01014197
267649
Bacillota
TAC
Val
>WENV182092258
OHHG01016380
44854
Bacillota
TGA
Ser
>WENV182092259
OHHG01016380
4624
Bacillota
GCT
Ser
>WENV182092263
OHHG01017238
59312
Bacillota
CAG
Leu
>WENV182092296
OHHG01023376
158247
Bacillota
>WENV182092305
OHHG01024595
238910
Bacillota
CTT
Lys
>WENV182092364
OHHG01038268
287000
Bacillota
GTT
Asn
>WENV182092365
OHHG01038268
338152
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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