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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182150199
OHLI01000383
256380
Bacillota
>WENV182150092
OHLI01000060
44859
Bacillota
AAG
Leu
>WENV182150476
OHLI01003138
144583
Bacillota
ACG
Arg
>WENV182150531
OHLI01004337
144594
Bacillota
CAC
Val
>WENV182150514
OHLI01003962
144594
Bacillota
CAC
Val
>WENV182150221
OHLI01000474
59312
Bacillota
CAG
Leu
>WENV182150334
OHLI01001428
58712
Bacillota
CAG
Leu
>WENV182150903
OHLI01051618
202812
Bacillota
CAT
Met
>WENV182150878
OHLI01041497
155273
Bacillota
CAT
Met
>WENV182150669
OHLI01010044
169968
Bacillota
CAT
Met
>WENV182150086
OHLI01000048
429429
Bacillota
CCA
Trp
>WENV182150420
OHLI01002443
245386
Bacillota
CCA
Trp
>WENV182150704
OHLI01013103
235171
Bacillota
CCA
Trp
>WENV182150792
OHLI01023801
245296
Bacillota
CCC
Gly
>WENV182150530
OHLI01004336
148188
Bacillota
CCG
Arg
>WENV182150581
OHLI01006144
245298
Bacillota
CGG
Pro
>WENV182150129
OHLI01000139
338147
Bacillota
CTC
Glu
>WENV182150375
OHLI01001809
338149
Bacillota
CTC
Glu
>WENV182150765
OHLI01019945
411547
Bacillota
CTG
Gln
>WENV182150672
OHLI01010333
238910
Bacillota
CTT
Lys
>WENV182150173
OHLI01000286
235142
Bacillota
CTT
Lys
>WENV182150376
OHLI01001809
272992
Bacillota
CTT
Lys
>WENV182150637
OHLI01008140
235079
Bacillota
GAA
Phe
>WENV182150244
OHLI01000622
238974
Bacillota
GAA
Phe
>WENV182150534
OHLI01004633
235098
Bacillota
GAC
Val
>WENV182150409
OHLI01002263
155958
Bacillota
GAT
Ile
>WENV182150559
OHLI01005606
173314
Bacillota
GAT
Ile
>WENV182150587
OHLI01006519
248965
Bacillota
GCC
Gly
>WENV182150414
OHLI01002298
4624
Bacillota
GCT
Ser
>WENV182150447
OHLI01002741
11034
Bacillota
GGA
Ser
>WENV182150702
OHLI01012941
235095
Bacillota
GGT
Thr
>WENV182150242
OHLI01000622
100326
Bacillota
GTA
Tyr
>WENV182150647
OHLI01008627
80612
Bacillota
GTA
Tyr
>WENV182150217
OHLI01000458
95563
Bacillota
GTA
Tyr
>WENV182150540
OHLI01004805
144599
Bacillota
GTC
Asp
>WENV182150346
OHLI01001502
157838
Bacillota
GTC
Asp
>WENV182150135
OHLI01000166
236037
Bacillota
GTG
His
>WENV182150538
OHLI01004805
235154
Bacillota
GTT
Asn
>WENV182150452
OHLI01002922
287000
Bacillota
GTT
Asn
>WENV182150451
OHLI01002922
287000
Bacillota
GTT
Asn
>WENV182150542
OHLI01004922
144621
Bacillota
GTT
Asn
>WENV182150177
OHLI01000305
267649
Bacillota
TAC
Val
>WENV182150345
OHLI01001502
263765
Bacillota
TAC
Val
>WENV182150865
OHLI01037863
144612
Bacillota
TCT
Arg
>WENV182150413
OHLI01002298
44854
Bacillota
TGA
Ser
>WENV182150250
OHLI01000680
37071
Bacillota
TGA
Ser
>WENV182150089
OHLI01000056
37269
Bacillota
TGA
Ser
>WENV182150802
OHLI01025717
235150
Bacillota
TGC
Ala
>WENV182150860
OHLI01036830
235137
Bacillota
TGC
Ala
>WENV182150835
OHLI01033638
247734
Bacillota
TGC
Ala
>WENV182150544
OHLI01005036
299139
Bacillota
TGC
Ala
>WENV182150484
OHLI01003267
157585
Bacillota
TGG
Pro
>WENV182150674
OHLI01010630
235124
Bacillota
TGG
Pro
>WENV182150426
OHLI01002448
347453
Bacillota
TGT
Thr
>WENV182150583
OHLI01006277
274189
Bacillota
TGT
Thr
>WENV182150728
OHLI01015294
338129
Bacillota
TGT
Thr
>WENV182150412
OHLI01002284
352996
Bacillota
TTC
Glu
>WENV182150373
OHLI01001765
338128
Bacillota
TTC
Glu
>WENV182150623
OHLI01007497
411549
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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