This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182161317
OHMF01013297
99852
Bacillota
GTA
Tyr
>WENV182161272
OHMF01009638
343590
Bacillota
GCC
Gly
>WENV182161393
OHMF01024100
280500
Bacillota
TGC
Ala
>WENV182161434
OHMF01035016
480520
Bacillota
TCC
Gly
>WENV182161205
OHMF01005396
405363
Bacillota
GCA
Cys
>WENV182161373
OHMF01020575
302145
Bacillota
GAA
Phe
>WENV182160952
OHMF01000335
280492
Bacillota
CTT
Lys
>WENV182161199
OHMF01004860
175842
Bacillota
CAC
Val
>WENV182161429
OHMF01032898
236579
Bacillota
GAT
Ile
>WENV182161428
OHMF01032898
295166
Bacillota
TGC
Ala
>WENV182161439
OHMF01035016
141334
Bacillota
TAG
Leu
>WENV182161173
OHMF01003989
190476
Bacillota
CAT
Met
>WENV182160954
OHMF01000354
73664
Bacillota
CAG
Leu
>WENV182161042
OHMF01001018
280447
Bacillota
GAC
Val
>WENV182161032
OHMF01000881
5692
Bacillota
GCT
Ser
>WENV182161484
OHMF01048370
186123
Bacillota
GTC
Asp
>WENV182161086
OHMF01001645
73009
Bacillota
CAG
Leu
>WENV182161444
OHMF01036118
291581
Bacillota
CGG
Pro
>WENV182161436
OHMF01035016
330433
Bacillota
GTG
His
>WENV182161142
OHMF01003088
175831
Bacillota
ACG
Arg
>WENV182161220
OHMF01006002
284627
Bacillota
GAA
Phe
>WENV182161401
OHMF01025938
284627
Bacillota
GAA
Phe
>WENV182161045
OHMF01001052
294020
Bacillota
TAC
Val
>WENV182161307
OHMF01011815
346451
Bacillota
TTT
Lys
>WENV182161048
OHMF01001063
480322
Bacillota
CTG
Gln
>WENV182161082
OHMF01001600
175868
Bacillota
GTT
Asn
>WENV182161081
OHMF01001600
398854
Bacillota
CTC
Glu
>WENV182161165
OHMF01003924
291576
Bacillota
CCC
Gly
>WENV182160999
OHMF01000669
480324
Bacillota
TTG
Gln
>WENV182161085
OHMF01001642
497729
Bacillota
CCA
Trp
>WENV182161159
OHMF01003798
56079
Bacillota
AAG
Leu
>WENV182161146
OHMF01003346
46655
Bacillota
TGA
Ser
>WENV182161449
OHMF01037877
186051
Bacillota
GAT
Ile
>WENV182160921
OHMF01000155
117745
Bacillota
GTA
Tyr
>WENV182161090
OHMF01001685
280444
Bacillota
GGT
Thr
>WENV182161438
OHMF01035016
354380
Bacillota
TTT
Lys
>WENV182161065
OHMF01001262
179755
Bacillota
CCG
Arg
>WENV182161166
OHMF01003970
179755
Bacillota
CCG
Arg
>WENV182161174
OHMF01003989
398832
Bacillota
TTC
Glu
>WENV182161435
OHMF01035016
203851
Bacillota
TCT
Arg
>WENV182160995
OHMF01000605
398852
Bacillota
CTC
Glu
>WENV182161294
OHMF01011190
289123
Bacillota
GGT
Thr
>WENV182161303
OHMF01011562
285601
Bacillota
TTC
Glu
>WENV182161340
OHMF01015424
398833
Bacillota
TGT
Thr
>WENV182161078
OHMF01001569
280463
Bacillota
TTT
Lys
>WENV182161361
OHMF01019283
405393
Bacillota
GCC
Gly
>WENV182161031
OHMF01000881
56074
Bacillota
TGA
Ser
>WENV182161258
OHMF01008208
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK