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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182613009
OJJZ01000020
235154
Bacillota
GTT
Asn
>WENV182613011
OJJZ01000020
429443
Bacillota
GCA
Cys
>WENV182613012
OJJZ01000021
235154
Bacillota
GTT
Asn
>WENV182613016
OJJZ01000021
149041
Bacillota
GTC
Asp
>WENV182613021
OJJZ01000042
10680
Bacillota
GGA
Ser
>WENV182613033
OJJZ01000087
59296
Bacillota
AAG
Leu
>WENV182613034
OJJZ01000087
235154
Bacillota
GTT
Asn
>WENV182613054
OJJZ01000145
146785
Bacillota
>WENV182613055
OJJZ01000150
18852
Bacillota
GCT
Ser
>WENV182613079
OJJZ01000403
59296
Bacillota
AAG
Leu
>WENV182613097
OJJZ01000416
270475
Bacillota
GAA
Phe
>WENV182613105
OJJZ01000468
338152
Bacillota
TTC
Glu
>WENV182613108
OJJZ01000469
149041
Bacillota
GTC
Asp
>WENV182613115
OJJZ01000471
154063
Bacillota
CGG
Pro
>WENV182613143
OJJZ01000607
338533
Bacillota
CCT
Arg
>WENV182613148
OJJZ01000775
144672
Bacillota
TCT
Arg
>WENV182613179
OJJZ01001905
193699
Bacillota
CAT
Met
>WENV182613184
OJJZ01002056
193699
Bacillota
CAT
Met
>WENV182613194
OJJZ01002816
338152
Bacillota
TTC
Glu
>WENV182613203
OJJZ01002908
144672
Bacillota
TCT
Arg
>WENV182613207
OJJZ01003104
235137
Bacillota
TGC
Ala
>WENV182613208
OJJZ01003290
193699
Bacillota
CAT
Met
>WENV182613210
OJJZ01004730
235137
Bacillota
TGC
Ala
>WENV182613213
OJJZ01005911
235137
Bacillota
TGC
Ala
>WENV182613219
OJJZ01007312
235137
Bacillota
TGC
Ala
>WENV182613220
OJJZ01007722
144833
Bacillota
ACG
Arg
>WENV182613221
OJJZ01007722
235288
Bacillota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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