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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170022670
BCQK01033650
482086
Bacteroidota
>WENV170022480
BCQK01013716
192263
Bacteroidota
CAT
Met
>WENV170023160
BCQK01141459
176557
Bacteroidota
CAT
Met
>WENV170023133
BCQK01133150
480996
Bacteroidota
CCA
Trp
>WENV170023303
BCQK01210015
480996
Bacteroidota
CCA
Trp
>WENV170022726
BCQK01040487
295349
Bacteroidota
CCA
Trp
>WENV170023063
BCQK01113324
296664
Bacteroidota
GAA
Phe
>WENV170022430
BCQK01010643
155807
Bacteroidota
GAC
Val
>WENV170022968
BCQK01090123
155807
Bacteroidota
GAC
Val
>WENV170022409
BCQK01009616
480568
Bacteroidota
GCA
Cys
>WENV170022678
BCQK01035236
74253
Bacteroidota
GCT
Ser
>WENV170022583
BCQK01022736
21872
Bacteroidota
GGA
Ser
>WENV170022637
BCQK01028568
179596
Bacteroidota
GGG
Pro
>WENV170022854
BCQK01061301
413853
Bacteroidota
GGT
Thr
>WENV170022958
BCQK01086868
181598
Bacteroidota
GTT
Asn
>WENV170022836
BCQK01058500
46780
Bacteroidota
TAA
Leu
>WENV170023074
BCQK01119148
77278
Bacteroidota
TAA
Leu
>WENV170022680
BCQK01035236
178367
Bacteroidota
TCT
Arg
>WENV170022777
BCQK01048072
56162
Bacteroidota
TGA
Ser
>WENV170022687
BCQK01036123
183480
Bacteroidota
TGC
Ala
>WENV170022679
BCQK01035236
156756
Bacteroidota
TGG
Pro
>WENV170022591
BCQK01023804
155808
Bacteroidota
TGG
Pro
>WENV170022706
BCQK01038196
155808
Bacteroidota
TGG
Pro
>WENV170022851
BCQK01061301
182234
Bacteroidota
TGT
Thr
>WENV170022817
BCQK01054690
404066
Bacteroidota
TTC
Glu
>WENV170023283
BCQK01198306
404066
Bacteroidota
TTC
Glu
>WENV170022972
BCQK01091579
284239
Bacteroidota
TTT
Lys
>WENV170023036
BCQK01108965
285588
Bacteroidota
TTT
Lys
>WENV170023037
BCQK01108965
285588
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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