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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170336309
CETA01004137
259147
Bacteroidota
TTT
Lys
>WENV170336313
CETA01004349
127458
Bacteroidota
GAC
Val
>WENV170336364
CETA01006113
193473
Bacteroidota
GTC
Asp
>WENV170336367
CETA01006527
274593
Bacteroidota
TTG
Gln
>WENV170336425
CETA01011241
240901
Bacteroidota
TTT
Lys
>WENV170336424
CETA01011241
240901
Bacteroidota
TTT
Lys
>WENV170336535
CETA01018336
338625
Bacteroidota
TTC
Glu
>WENV170336534
CETA01018336
338625
Bacteroidota
TTC
Glu
>WENV170336538
CETA01018400
60695
Bacteroidota
GCT
Ser
>WENV170336635
CETA01028060
154388
Bacteroidota
GTG
His
>WENV170336670
CETA01029886
416430
Bacteroidota
GCA
Cys
>WENV170336764
CETA01036462
236125
Bacteroidota
GAA
Phe
>WENV170336819
CETA01042076
139286
Bacteroidota
TGG
Pro
>WENV170336856
CETA01044600
308806
Bacteroidota
TCC
Gly
>WENV170336918
CETA01051053
193473
Bacteroidota
GTC
Asp
>WENV170336951
CETA01055582
193627
Bacteroidota
TCT
Arg
>WENV170336967
CETA01057560
160686
Bacteroidota
CAT
Met
>WENV170337161
CETA01078233
235802
Bacteroidota
CAT
Met
>WENV170337196
CETA01084312
127458
Bacteroidota
GAC
Val
>WENV170337205
CETA01085223
308806
Bacteroidota
TCC
Gly
>WENV170337206
CETA01085223
342872
Bacteroidota
GGT
Thr
>WENV170337245
CETA01089911
274593
Bacteroidota
TTG
Gln
>WENV170337257
CETA01091403
187493
Bacteroidota
GGC
Ala
>WENV170337287
CETA01094602
163646
Bacteroidota
CAT
Met
>WENV170337375
CETA01105593
148047
Bacteroidota
CAT
Met
>WENV170337386
CETA01107291
153768
Bacteroidota
TGC
Ala
>WENV170337423
CETA01111623
273242
Bacteroidota
CCA
Trp
>WENV170337508
CETA01124824
238764
Bacteroidota
>WENV170337580
CETA01132570
290994
Bacteroidota
CAT
Met
>WENV170337587
CETA01133802
179080
Bacteroidota
CAT
Met
>WENV170337667
CETA01146284
274593
Bacteroidota
TTG
Gln
>WENV170337723
CETA01151585
353409
Bacteroidota
CCT
Arg
>WENV170337806
CETA01153692
172532
Bacteroidota
GTC
Asp
>WENV170337950
CETA01224937
148135
Bacteroidota
GGG
Pro
>WENV170337978
CETA01235423
165044
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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