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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180006331
FLRY01010200
187400
Bacteroidota
GTT
Asn
>WENV180006360
FLRY01017833
30780
Bacteroidota
GCT
Ser
>WENV180006381
FLRY01022819
187400
Bacteroidota
GTT
Asn
>WENV180006383
FLRY01023605
404662
Bacteroidota
CCT
Arg
>WENV180006396
FLRY01030011
47445
Bacteroidota
TAA
Leu
>WENV180006409
FLRY01037554
404663
Bacteroidota
GGT
Thr
>WENV180006410
FLRY01037554
372845
Bacteroidota
CCA
Trp
>WENV180006416
FLRY01039625
482908
Bacteroidota
GCA
Cys
>WENV180006424
FLRY01047181
191205
Bacteroidota
TGG
Pro
>WENV180006513
FLRY01094336
285750
Bacteroidota
CCC
Gly
>WENV180006525
FLRY01102857
290466
Bacteroidota
CCA
Trp
>WENV180006554
FLRY01120586
175886
Bacteroidota
GGC
Ala
>WENV180006564
FLRY01127252
280478
Bacteroidota
GCC
Gly
>WENV180006630
FLRY01162556
293174
Bacteroidota
CCC
Gly
>WENV180006635
FLRY01164730
75001
Bacteroidota
CAA
Leu
>WENV180006735
FLRY01263533
75391
Bacteroidota
GAG
Leu
>WENV180006740
FLRY01265950
483469
Bacteroidota
TTG
Gln
>WENV180006746
FLRY01268252
222068
Bacteroidota
GAT
Ile
>WENV180006766
FLRY01289798
222068
Bacteroidota
GAT
Ile
>WENV180006767
FLRY01289798
179822
Bacteroidota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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