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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
132 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181112382
OEEL01000576
118433
Bacteroidota
TAG
Leu
>WENV181112569
OEEL01001410
118433
Bacteroidota
TAG
Leu
>WENV181112639
OEEL01001772
118433
Bacteroidota
TAG
Leu
>WENV181112995
OEEL01008069
118433
Bacteroidota
TAG
Leu
>WENV181112516
OEEL01001113
400161
Bacteroidota
GGT
Thr
>WENV181111978
OEEL01000057
156422
Bacteroidota
TAC
Val
>WENV181112105
OEEL01000156
156422
Bacteroidota
TAC
Val
>WENV181112225
OEEL01000260
156422
Bacteroidota
TAC
Val
>WENV181112544
OEEL01001284
156422
Bacteroidota
TAC
Val
>WENV181112605
OEEL01001627
156422
Bacteroidota
TAC
Val
>WENV181112839
OEEL01004004
156422
Bacteroidota
TAC
Val
>WENV181113139
OEEL01012882
156422
Bacteroidota
TAC
Val
>WENV181113182
OEEL01014317
156422
Bacteroidota
TAC
Val
>WENV181111890
OEEL01000021
282852
Bacteroidota
TTT
Lys
>WENV181112151
OEEL01000193
282852
Bacteroidota
TTT
Lys
>WENV181112301
OEEL01000362
282852
Bacteroidota
TTT
Lys
>WENV181112356
OEEL01000504
282852
Bacteroidota
TTT
Lys
>WENV181112570
OEEL01001421
481329
Bacteroidota
>WENV181112716
OEEL01002554
481329
Bacteroidota
>WENV181112397
OEEL01000615
400949
Bacteroidota
CCT
Arg
>WENV181112533
OEEL01001225
400949
Bacteroidota
CCT
Arg
>WENV181111899
OEEL01000023
118221
Bacteroidota
CAA
Leu
>WENV181112456
OEEL01000846
118221
Bacteroidota
CAA
Leu
>WENV181112681
OEEL01002232
284237
Bacteroidota
TTT
Lys
>WENV181112377
OEEL01000570
481267
Bacteroidota
CTG
Gln
>WENV181113285
OEEL01018720
157146
Bacteroidota
TAC
Val
>WENV181113286
OEEL01018720
157146
Bacteroidota
TAC
Val
>WENV181113287
OEEL01018720
157146
Bacteroidota
TAC
Val
>WENV181113756
OEEL01097406
179464
Bacteroidota
CAT
Met
>WENV181111915
OEEL01000033
156068
Bacteroidota
TAC
Val
>WENV181111936
OEEL01000038
156068
Bacteroidota
TAC
Val
>WENV181111937
OEEL01000038
156068
Bacteroidota
TAC
Val
>WENV181112344
OEEL01000482
283316
Bacteroidota
CCA
Trp
>WENV181112517
OEEL01001113
283316
Bacteroidota
CCA
Trp
>WENV181112578
OEEL01001466
283316
Bacteroidota
CCA
Trp
>WENV181111972
OEEL01000054
178571
Bacteroidota
GTT
Asn
>WENV181112587
OEEL01001532
178571
Bacteroidota
GTT
Asn
>WENV181112642
OEEL01001848
178571
Bacteroidota
GTT
Asn
>WENV181112948
OEEL01006737
178571
Bacteroidota
GTT
Asn
>WENV181111992
OEEL01000067
178572
Bacteroidota
CAT
Met
>WENV181112791
OEEL01003145
178572
Bacteroidota
CAT
Met
>WENV181112829
OEEL01003818
178572
Bacteroidota
CAT
Met
>WENV181112034
OEEL01000099
118379
Bacteroidota
TAG
Leu
>WENV181112579
OEEL01001469
56385
Bacteroidota
TGA
Ser
>WENV181113083
OEEL01011049
56385
Bacteroidota
TGA
Ser
>WENV181113782
OEEL01109201
483528
Bacteroidota
GCA
Cys
>WENV181111979
OEEL01000059
30327
Bacteroidota
GCT
Ser
>WENV181113787
OEEL01115463
20356
Bacteroidota
GGA
Ser
>WENV181113116
OEEL01011974
178133
Bacteroidota
GAT
Ile
>WENV181113496
OEEL01032829
178133
Bacteroidota
GAT
Ile
>WENV181113560
OEEL01041287
178133
Bacteroidota
GAT
Ile
>WENV181113815
OEEL01138022
178133
Bacteroidota
GAT
Ile
>WENV181113763
OEEL01100241
120205
Bacteroidota
TAG
Leu
>WENV181113429
OEEL01026282
404663
Bacteroidota
GGT
Thr
>WENV181113448
OEEL01027335
400850
Bacteroidota
TTC
Glu
>WENV181113400
OEEL01025038
292874
Bacteroidota
GAA
Phe
>WENV181112161
OEEL01000202
175944
Bacteroidota
CAT
Met
>WENV181113832
OEEL01148657
175944
Bacteroidota
CAT
Met
>WENV181113373
OEEL01022646
175886
Bacteroidota
GGC
Ala
>WENV181112029
OEEL01000091
283315
Bacteroidota
CGT
Thr
>WENV181112299
OEEL01000360
283315
Bacteroidota
CGT
Thr
>WENV181112363
OEEL01000536
283315
Bacteroidota
CGT
Thr
>WENV181112905
OEEL01005588
283315
Bacteroidota
CGT
Thr
>WENV181113504
OEEL01033728
283315
Bacteroidota
CGT
Thr
>WENV181112014
OEEL01000082
400815
Bacteroidota
TTC
Glu
>WENV181111865
OEEL01000016
156128
Bacteroidota
GGG
Pro
>WENV181112407
OEEL01000657
20533
Bacteroidota
GGA
Ser
>WENV181113806
OEEL01129319
187358
Bacteroidota
GTG
His
>WENV181113433
OEEL01026618
404109
Bacteroidota
CTC
Glu
>WENV181113434
OEEL01026618
404109
Bacteroidota
CTC
Glu
>WENV181113694
OEEL01069885
404109
Bacteroidota
CTC
Glu
>WENV181113850
OEEL01149725
404109
Bacteroidota
CTC
Glu
>WENV181113348
OEEL01020826
180199
Bacteroidota
CAT
Met
>WENV181112292
OEEL01000350
156383
Bacteroidota
GGG
Pro
>WENV181112536
OEEL01001257
156383
Bacteroidota
GGG
Pro
>WENV181112553
OEEL01001310
156383
Bacteroidota
GGG
Pro
>WENV181112675
OEEL01002160
156383
Bacteroidota
GGG
Pro
>WENV181113573
OEEL01043000
179822
Bacteroidota
TGC
Ala
>WENV181112228
OEEL01000272
46648
Bacteroidota
TAA
Leu
>WENV181112235
OEEL01000289
46648
Bacteroidota
TAA
Leu
>WENV181112550
OEEL01001295
46648
Bacteroidota
TAA
Leu
>WENV181112555
OEEL01001317
46648
Bacteroidota
TAA
Leu
>WENV181112620
OEEL01001669
46648
Bacteroidota
TAA
Leu
>WENV181112137
OEEL01000183
118432
Bacteroidota
CAG
Leu
>WENV181112563
OEEL01001386
118432
Bacteroidota
CAG
Leu
>WENV181113307
OEEL01019469
280478
Bacteroidota
GCC
Gly
>WENV181112032
OEEL01000094
284236
Bacteroidota
CGG
Pro
>WENV181113213
OEEL01015461
481284
Bacteroidota
CCA
Trp
>WENV181112142
OEEL01000187
187400
Bacteroidota
GTT
Asn
>WENV181112143
OEEL01000187
187400
Bacteroidota
GTT
Asn
>WENV181113352
OEEL01021140
21008
Bacteroidota
GGA
Ser
>WENV181111849
OEEL01000010
284457
Bacteroidota
CAT
Met
>WENV181112064
OEEL01000122
284457
Bacteroidota
CAT
Met
>WENV181112583
OEEL01001481
284457
Bacteroidota
CAT
Met
>WENV181112918
OEEL01006038
284457
Bacteroidota
CAT
Met
>WENV181113294
OEEL01019003
284457
Bacteroidota
CAT
Met
>WENV181112784
OEEL01003106
187814
Bacteroidota
GTC
Asp
>WENV181112059
OEEL01000120
178134
Bacteroidota
TGG
Pro
>WENV181112540
OEEL01001269
178134
Bacteroidota
TGG
Pro
>WENV181112660
OEEL01002040
178134
Bacteroidota
TGG
Pro
>WENV181111889
OEEL01000021
118220
Bacteroidota
GTA
Tyr
>WENV181112515
OEEL01001113
118220
Bacteroidota
GTA
Tyr
>WENV181113140
OEEL01012882
118220
Bacteroidota
GTA
Tyr
>WENV181113183
OEEL01014317
118220
Bacteroidota
GTA
Tyr
>WENV181113315
OEEL01019776
284313
Bacteroidota
TTT
Lys
>WENV181113248
OEEL01016898
119316
Bacteroidota
TAG
Leu
>WENV181113427
OEEL01026265
101147
Bacteroidota
CAG
Leu
>WENV181111900
OEEL01000024
481044
Bacteroidota
>WENV181112328
OEEL01000403
179653
Bacteroidota
GTG
His
>WENV181112573
OEEL01001437
179653
Bacteroidota
GTG
His
>WENV181112416
OEEL01000692
481328
Bacteroidota
TTG
Gln
>WENV181112417
OEEL01000692
481328
Bacteroidota
TTG
Gln
>WENV181112432
OEEL01000733
481328
Bacteroidota
TTG
Gln
>WENV181112483
OEEL01000959
481328
Bacteroidota
TTG
Gln
>WENV181113837
OEEL01149053
481328
Bacteroidota
TTG
Gln
>WENV181113249
OEEL01016898
285586
Bacteroidota
GCC
Gly
>WENV181113353
OEEL01021156
400088
Bacteroidota
GGT
Thr
>WENV181112031
OEEL01000093
284456
Bacteroidota
CGG
Pro
>WENV181112054
OEEL01000113
284456
Bacteroidota
CGG
Pro
>WENV181112094
OEEL01000143
284456
Bacteroidota
CGG
Pro
>WENV181112564
OEEL01001386
73509
Bacteroidota
GAG
Leu
>WENV181113197
OEEL01014837
73509
Bacteroidota
GAG
Leu
>WENV181113831
OEEL01147885
73509
Bacteroidota
GAG
Leu
>WENV181113724
OEEL01074793
75391
Bacteroidota
GAG
Leu
>WENV181113094
OEEL01011243
186143
Bacteroidota
TGC
Ala
>WENV181112030
OEEL01000091
481045
Bacteroidota
CCC
Gly
>WENV181112300
OEEL01000360
481045
Bacteroidota
CCC
Gly
>WENV181112906
OEEL01005588
481045
Bacteroidota
CCC
Gly
>WENV181113505
OEEL01033728
481045
Bacteroidota
CCC
Gly
>WENV181112936
OEEL01006523
179470
Bacteroidota
TCT
Arg
>WENV181113774
OEEL01106566
406019
Bacteroidota
CCG
Arg
>WENV181112935
OEEL01006523
157477
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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