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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183726233
PJQF01129720
238673
Bacteroidota
GAA
Phe
>WENV183726291
PJQF01149525
151513
Bacteroidota
TGC
Ala
>WENV183725667
PJQF01005950
241469
Bacteroidota
GAA
Phe
>WENV183725682
PJQF01007560
155147
Bacteroidota
GGC
Ala
>WENV183725649
PJQF01004874
159029
Bacteroidota
GTG
His
>WENV183726158
PJQF01096549
148247
Bacteroidota
TGC
Ala
>WENV183726236
PJQF01132241
148163
Bacteroidota
TTT
Lys
>WENV183725837
PJQF01022841
148318
Bacteroidota
GTT
Asn
>WENV183725907
PJQF01035308
159045
Bacteroidota
CAT
Met
>WENV183725457
PJQF01000058
251069
Bacteroidota
TCC
Gly
>WENV183725481
PJQF01000137
145155
Bacteroidota
GGC
Ala
>WENV183725620
PJQF01003806
153768
Bacteroidota
TGC
Ala
>WENV183725691
PJQF01008109
347866
Bacteroidota
TTC
Glu
>WENV183725508
PJQF01000286
347866
Bacteroidota
TTC
Glu
>WENV183725736
PJQF01011473
59413
Bacteroidota
GCT
Ser
>WENV183725749
PJQF01012541
242581
Bacteroidota
TTT
Lys
>WENV183725748
PJQF01012541
242581
Bacteroidota
TTT
Lys
>WENV183726289
PJQF01149374
23774
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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