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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180754849
ODHU01001703
240188
Betaproteobacteria
GAA
Phe
>WENV180754953
ODHU01004816
235250
Betaproteobacteria
>WENV180754954
ODHU01004816
235250
Betaproteobacteria
>WENV180754955
ODHU01004816
235250
Betaproteobacteria
>WENV180755030
ODHU01008369
256200
Betaproteobacteria
CGT
Thr
>WENV180755075
ODHU01012455
155690
Betaproteobacteria
TCT
Arg
>WENV180755092
ODHU01014210
352197
Betaproteobacteria
GGT
Thr
>WENV180755176
ODHU01026894
95890
Betaproteobacteria
CAA
Leu
>WENV180755200
ODHU01034193
155338
Betaproteobacteria
>WENV180755266
ODHU01063480
240188
Betaproteobacteria
GAA
Phe
>WENV180755365
ODHU01136384
155338
Betaproteobacteria
>WENV180755390
ODHU01141480
238786
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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