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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180934441
ODTS01000068
256200
Betaproteobacteria
CGT
Thr
>WENV180934463
ODTS01000114
95890
Betaproteobacteria
CAA
Leu
>WENV180934524
ODTS01000236
235250
Betaproteobacteria
>WENV180934525
ODTS01000236
235250
Betaproteobacteria
>WENV180934526
ODTS01000236
235250
Betaproteobacteria
>WENV180934527
ODTS01000236
235250
Betaproteobacteria
>WENV180934732
ODTS01001906
240188
Betaproteobacteria
GAA
Phe
>WENV180934847
ODTS01004827
16424
Betaproteobacteria
GGA
Ser
>WENV180934913
ODTS01009360
95890
Betaproteobacteria
CAA
Leu
>WENV180934999
ODTS01019347
159509
Betaproteobacteria
CAT
Met
>WENV180935006
ODTS01020518
240188
Betaproteobacteria
GAA
Phe
>WENV180935008
ODTS01020677
240188
Betaproteobacteria
GAA
Phe
>WENV180935112
ODTS01060684
155338
Betaproteobacteria
>WENV180935156
ODTS01077345
155690
Betaproteobacteria
TCT
Arg
>WENV180935212
ODTS01114323
387094
Betaproteobacteria
GGT
Thr
>WENV180935243
ODTS01135716
240188
Betaproteobacteria
GAA
Phe
>WENV180935264
ODTS01144548
235250
Betaproteobacteria
>WENV180935265
ODTS01144591
159509
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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