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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180012512
FMSI01004263
307757
Cyanobacteriota
TAC
Val
>WENV180012772
FMSI01019452
239056
Cyanobacteriota
CCT
Arg
>WENV180012816
FMSI01022071
132448
Cyanobacteriota
GTA
Tyr
>WENV180012887
FMSI01027829
131445
Cyanobacteriota
CAA
Leu
>WENV180012896
FMSI01028462
4100
Cyanobacteriota
GCT
Ser
>WENV180013244
FMSI01059232
128717
Cyanobacteriota
TAG
Leu
>WENV180013445
FMSI01084587
39071
Cyanobacteriota
TGA
Ser
>WENV180013462
FMSI01086933
58760
Cyanobacteriota
GGA
Ser
>WENV180013654
FMSI01121304
212126
Cyanobacteriota
GTC
Asp
>WENV180013665
FMSI01124357
342000
Cyanobacteriota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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