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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180721671
ODGL01005245
113955
Fusobacteriota
>WENV180721917
ODGL01030631
151860
Fusobacteriota
ACG
Arg
>WENV180721517
ODGL01001170
144694
Fusobacteriota
CAT
Met
>WENV180721669
ODGL01005245
127801
Fusobacteriota
CAT
Met
>WENV180721665
ODGL01005245
151856
Fusobacteriota
CAT
Met
>WENV180721786
ODGL01013539
151861
Fusobacteriota
CCT
Arg
>WENV180721675
ODGL01005245
242891
Fusobacteriota
CTT
Lys
>WENV180722051
ODGL01065932
24344
Fusobacteriota
GCT
Ser
>WENV180722062
ODGL01069576
242888
Fusobacteriota
GTT
Asn
>WENV180721664
ODGL01005245
45759
Fusobacteriota
TAA
Leu
>WENV180721937
ODGL01033823
113605
Fusobacteriota
TAG
Leu
>WENV180721668
ODGL01005245
151857
Fusobacteriota
TCT
Arg
>WENV180722071
ODGL01072958
246241
Fusobacteriota
TGC
Ala
>WENV180721676
ODGL01005245
342642
Fusobacteriota
TTC
Glu
>WENV180721670
ODGL01005245
342642
Fusobacteriota
TTC
Glu
>WENV180722126
ODGL01099937
243606
Fusobacteriota
TTT
Lys
>WENV180721936
ODGL01033823
235188
Fusobacteriota
TTT
Lys
>WENV180721667
ODGL01005245
235188
Fusobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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