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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181059997
ODYM01024406
183770
Fusobacteriota
GAT
Ile
>WENV181059378
ODYM01000893
187804
Fusobacteriota
GTC
Asp
>WENV181059385
ODYM01000893
187804
Fusobacteriota
GTC
Asp
>WENV181059467
ODYM01001261
141145
Fusobacteriota
>WENV181059377
ODYM01000893
288879
Fusobacteriota
TAC
Val
>WENV181059384
ODYM01000893
288879
Fusobacteriota
TAC
Val
>WENV181059851
ODYM01014605
119283
Fusobacteriota
GTA
Tyr
>WENV181059578
ODYM01002923
289706
Fusobacteriota
GTG
His
>WENV181059304
ODYM01000510
280538
Fusobacteriota
TTT
Lys
>WENV181059463
ODYM01001261
280538
Fusobacteriota
TTT
Lys
>WENV181059210
ODYM01000060
184485
Fusobacteriota
GTC
Asp
>WENV181059313
ODYM01000520
184485
Fusobacteriota
GTC
Asp
>WENV181059516
ODYM01001924
184487
Fusobacteriota
TCT
Arg
>WENV181059389
ODYM01000893
183767
Fusobacteriota
TGC
Ala
>WENV181059998
ODYM01024406
183767
Fusobacteriota
TGC
Ala
>WENV181059465
ODYM01001261
156979
Fusobacteriota
CAT
Met
>WENV181059460
ODYM01001261
57899
Fusobacteriota
TAA
Leu
>WENV181059305
ODYM01000510
143640
Fusobacteriota
TAG
Leu
>WENV181059387
ODYM01000893
143640
Fusobacteriota
TAG
Leu
>WENV181059303
ODYM01000510
358658
Fusobacteriota
GTG
His
>WENV181060252
ODYM01078829
292614
Fusobacteriota
TGC
Ala
>WENV181059340
ODYM01000706
187240
Fusobacteriota
TCG
Arg
>WENV181060131
ODYM01045261
187240
Fusobacteriota
TCG
Arg
>WENV181059299
ODYM01000496
288877
Fusobacteriota
GTT
Asn
>WENV181059943
ODYM01019934
288877
Fusobacteriota
GTT
Asn
>WENV181060064
ODYM01034015
288877
Fusobacteriota
GTT
Asn
>WENV181059515
ODYM01001924
292724
Fusobacteriota
TTT
Lys
>WENV181059579
ODYM01002923
292724
Fusobacteriota
TTT
Lys
>WENV181059383
ODYM01000893
407549
Fusobacteriota
TTC
Glu
>WENV181060410
ODYM01165128
407549
Fusobacteriota
TTC
Glu
>WENV181059386
ODYM01000893
288878
Fusobacteriota
TGT
Thr
>WENV181059891
ODYM01016423
288878
Fusobacteriota
TGT
Thr
>WENV181059461
ODYM01001261
214188
Fusobacteriota
CAT
Met
>WENV181059984
ODYM01023536
289708
Fusobacteriota
TGT
Thr
>WENV181059464
ODYM01001261
183769
Fusobacteriota
TCT
Arg
>WENV181059380
ODYM01000893
484173
Fusobacteriota
GCA
Cys
>WENV181059478
ODYM01001314
74687
Fusobacteriota
CAA
Leu
>WENV181059477
ODYM01001314
183772
Fusobacteriota
ACG
Arg
>WENV181059301
ODYM01000510
202720
Fusobacteriota
TGG
Pro
>WENV181059391
ODYM01000893
202720
Fusobacteriota
TGG
Pro
>WENV181059390
ODYM01000893
192090
Fusobacteriota
CAT
Met
>WENV181059382
ODYM01000893
288880
Fusobacteriota
CTT
Lys
>WENV181059704
ODYM01006337
47168
Fusobacteriota
GCT
Ser
>WENV181059620
ODYM01003868
404073
Fusobacteriota
TTG
Gln
>WENV181059466
ODYM01001261
403662
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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