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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180358115
OBNP01000550
480941
Gammaproteobacteria
TCC
Gly
>WENV180358196
OBNP01008480
21535
Gammaproteobacteria
GCT
Ser
>WENV180358474
OBNP01069705
328691
Gammaproteobacteria
GGT
Thr
>WENV180358165
OBNP01004573
451630
Gammaproteobacteria
TCC
Gly
>WENV180358544
OBNP01091133
117798
Gammaproteobacteria
CAA
Leu
>WENV180358119
OBNP01000797
281668
Gammaproteobacteria
TTT
Lys
>WENV180358516
OBNP01083407
179595
Gammaproteobacteria
GAC
Val
>WENV180358559
OBNP01098134
232119
Gammaproteobacteria
ACG
Arg
>WENV180358276
OBNP01021082
176301
Gammaproteobacteria
GAT
Ile
>WENV180358480
OBNP01072214
10034
Gammaproteobacteria
GCT
Ser
>WENV180358223
OBNP01012069
179710
Gammaproteobacteria
GAC
Val
>WENV180358452
OBNP01065220
180679
Gammaproteobacteria
CCA
Trp
>WENV180358121
OBNP01001120
283486
Gammaproteobacteria
TGT
Thr
>WENV180358211
OBNP01010030
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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