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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181125508
OEFU01000050
147499
Gammaproteobacteria
CTT
Lys
>WENV181125510
OEFU01000083
145168
Gammaproteobacteria
CAT
Met
>WENV181125511
OEFU01000089
3278
Gammaproteobacteria
>WENV181125513
OEFU01000148
24813
Gammaproteobacteria
TGA
Ser
>WENV181125546
OEFU01001355
340342
Gammaproteobacteria
TTG
Gln
>WENV181125647
OEFU01007817
58828
Gammaproteobacteria
TAA
Leu
>WENV181125654
OEFU01008435
268376
Gammaproteobacteria
CTT
Lys
>WENV181125669
OEFU01010316
97795
Gammaproteobacteria
GTA
Tyr
>WENV181125716
OEFU01014995
358575
Gammaproteobacteria
TCC
Gly
>WENV181125717
OEFU01014995
240084
Gammaproteobacteria
GGT
Thr
>WENV181125719
OEFU01015186
235793
Gammaproteobacteria
CAT
Met
>WENV181125730
OEFU01018319
152293
Gammaproteobacteria
ACG
Arg
>WENV181125740
OEFU01019996
81880
Gammaproteobacteria
GAG
Leu
>WENV181125782
OEFU01031429
23436
Gammaproteobacteria
GGA
Ser
>WENV181125801
OEFU01036755
3276
Gammaproteobacteria
>WENV181125846
OEFU01057475
23436
Gammaproteobacteria
GGA
Ser
>WENV181125863
OEFU01064041
81880
Gammaproteobacteria
GAG
Leu
>WENV181125906
OEFU01097522
80672
Gammaproteobacteria
GAG
Leu
>WENV181125972
OEFU01142566
147761
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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