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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182553952
OJCR01065719
235887
Gammaproteobacteria
GTG
His
>WENV182553364
OJCR01002533
313881
Gammaproteobacteria
GGC
Ala
>WENV182553539
OJCR01010133
313881
Gammaproteobacteria
GGC
Ala
>WENV182553161
OJCR01000204
14613
Gammaproteobacteria
TGA
Ser
>WENV182553167
OJCR01000245
279385
Gammaproteobacteria
TTT
Lys
>WENV182553198
OJCR01000421
279385
Gammaproteobacteria
TTT
Lys
>WENV182553471
OJCR01006288
113631
Gammaproteobacteria
GTA
Tyr
>WENV182553265
OJCR01001057
236480
Gammaproteobacteria
GTG
His
>WENV182553282
OJCR01001223
149035
Gammaproteobacteria
CCG
Arg
>WENV182553376
OJCR01002814
145368
Gammaproteobacteria
CCT
Arg
>WENV182553334
OJCR01001763
58822
Gammaproteobacteria
CAA
Leu
>WENV182553877
OJCR01045500
147053
Gammaproteobacteria
GTT
Asn
>WENV182553326
OJCR01001586
145260
Gammaproteobacteria
CAT
Met
>WENV182553185
OJCR01000327
160030
Gammaproteobacteria
GGG
Pro
>WENV182553384
OJCR01002960
145367
Gammaproteobacteria
GGG
Pro
>WENV182553202
OJCR01000449
163940
Gammaproteobacteria
CCG
Arg
>WENV182553377
OJCR01002817
240619
Gammaproteobacteria
TGT
Thr
>WENV182553410
OJCR01003754
149036
Gammaproteobacteria
CCA
Trp
>WENV182553157
OJCR01000172
149036
Gammaproteobacteria
CCA
Trp
>WENV182553088
OJCR01000014
149036
Gammaproteobacteria
CCA
Trp
>WENV182553472
OJCR01006288
338534
Gammaproteobacteria
TCC
Gly
>WENV182553140
OJCR01000099
145261
Gammaproteobacteria
CAT
Met
>WENV182553412
OJCR01003818
16284
Gammaproteobacteria
TGA
Ser
>WENV182553675
OJCR01019570
145369
Gammaproteobacteria
CGG
Pro
>WENV182553917
OJCR01053582
237425
Gammaproteobacteria
TTC
Glu
>WENV182553671
OJCR01019431
174801
Gammaproteobacteria
TGG
Pro
>WENV182553480
OJCR01006688
45345
Gammaproteobacteria
GGA
Ser
>WENV182553120
OJCR01000053
340801
Gammaproteobacteria
CCT
Arg
>WENV182553191
OJCR01000374
289927
Gammaproteobacteria
GAA
Phe
>WENV182553132
OJCR01000069
289927
Gammaproteobacteria
GAA
Phe
>WENV182553266
OJCR01001057
97031
Gammaproteobacteria
TAG
Leu
>WENV182553928
OJCR01056441
199268
Gammaproteobacteria
ACG
Arg
>WENV182553838
OJCR01038350
6972
Gammaproteobacteria
>WENV182553465
OJCR01006183
149038
Gammaproteobacteria
TGG
Pro
>WENV182553267
OJCR01001057
149038
Gammaproteobacteria
TGG
Pro
>WENV182553891
OJCR01048838
294663
Gammaproteobacteria
TTC
Glu
>WENV182553264
OJCR01001055
59830
Gammaproteobacteria
CAA
Leu
>WENV182553346
OJCR01002036
240084
Gammaproteobacteria
GGT
Thr
>WENV182553701
OJCR01022420
237412
Gammaproteobacteria
TAC
Val
>WENV182553219
OJCR01000600
311863
Gammaproteobacteria
GGC
Ala
>WENV182553445
OJCR01005190
145365
Gammaproteobacteria
GAC
Val
>WENV182553386
OJCR01003046
145365
Gammaproteobacteria
GAC
Val
>WENV182553242
OJCR01000775
148452
Gammaproteobacteria
CCT
Arg
>WENV182553250
OJCR01000938
241136
Gammaproteobacteria
TTG
Gln
>WENV182553208
OJCR01000513
241136
Gammaproteobacteria
TTG
Gln
>WENV182553479
OJCR01006673
235886
Gammaproteobacteria
TTC
Glu
>WENV182553370
OJCR01002682
235886
Gammaproteobacteria
TTC
Glu
>WENV182553367
OJCR01002589
243921
Gammaproteobacteria
TTT
Lys
>WENV182553102
OJCR01000026
59658
Gammaproteobacteria
CAA
Leu
>WENV182553633
OJCR01015673
149661
Gammaproteobacteria
CAT
Met
>WENV182553614
OJCR01014944
237421
Gammaproteobacteria
TGT
Thr
>WENV182553767
OJCR01029583
182592
Gammaproteobacteria
GAC
Val
>WENV182553268
OJCR01001058
149037
Gammaproteobacteria
GAC
Val
>WENV182553138
OJCR01000090
149037
Gammaproteobacteria
GAC
Val
>WENV182553874
OJCR01044806
16840
Gammaproteobacteria
GGA
Ser
>WENV182553104
OJCR01000031
411735
Gammaproteobacteria
GCA
Cys
>WENV182553260
OJCR01001038
175964
Gammaproteobacteria
CAT
Met
>WENV182553200
OJCR01000442
17379
Gammaproteobacteria
GCT
Ser
>WENV182553274
OJCR01001099
59485
Gammaproteobacteria
CAG
Leu
>WENV182553787
OJCR01031928
150183
Gammaproteobacteria
CCG
Arg
>WENV182553629
OJCR01015505
59979
Gammaproteobacteria
TAA
Leu
>WENV182553194
OJCR01000385
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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