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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183735471
PJUB01000012
23711
Gammaproteobacteria
GGA
Ser
>WENV183735413
PJUB01000001
7214
Gammaproteobacteria
GCT
Ser
>WENV183735408
PJUB01000001
412176
Gammaproteobacteria
CCC
Gly
>WENV183735425
PJUB01000003
51143
Gammaproteobacteria
TGA
Ser
>WENV183735526
PJUB01000028
16446
Gammaproteobacteria
GCT
Ser
>WENV183735497
PJUB01000017
279806
Gammaproteobacteria
TGT
Thr
>WENV183735534
PJUB01000034
298259
Gammaproteobacteria
GAA
Phe
>WENV183735447
PJUB01000007
182303
Gammaproteobacteria
GTG
His
>WENV183735890
PJUB01008634
95635
Gammaproteobacteria
CAA
Leu
>WENV183735510
PJUB01000025
266908
Gammaproteobacteria
CGC
Ala
>WENV183735496
PJUB01000017
238307
Gammaproteobacteria
GAA
Phe
>WENV183735430
PJUB01000003
96066
Gammaproteobacteria
TAA
Leu
>WENV183736009
PJUB01031409
165964
Gammaproteobacteria
ACG
Arg
>WENV183736008
PJUB01031409
165964
Gammaproteobacteria
ACG
Arg
>WENV183735575
PJUB01000064
165964
Gammaproteobacteria
ACG
Arg
>WENV183735574
PJUB01000064
165964
Gammaproteobacteria
ACG
Arg
>WENV183735528
PJUB01000028
165964
Gammaproteobacteria
ACG
Arg
>WENV183735527
PJUB01000028
165964
Gammaproteobacteria
ACG
Arg
>WENV183735576
PJUB01000064
147595
Gammaproteobacteria
CCT
Arg
>WENV183735529
PJUB01000029
353410
Gammaproteobacteria
CTG
Gln
>WENV183735452
PJUB01000007
16238
Gammaproteobacteria
CGA
Ser
>WENV183735498
PJUB01000017
145334
Gammaproteobacteria
CCG
Arg
>WENV183735518
PJUB01000026
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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