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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183743186
PJUJ01000121
7214
Gammaproteobacteria
GCT
Ser
>WENV183743483
PJUJ01002113
95633
Gammaproteobacteria
GTA
Tyr
>WENV183743106
PJUJ01000038
235516
Gammaproteobacteria
GTG
His
>WENV183742964
PJUJ01000001
412176
Gammaproteobacteria
CCC
Gly
>WENV183743002
PJUJ01000007
144979
Gammaproteobacteria
CGG
Pro
>WENV183743090
PJUJ01000029
195519
Gammaproteobacteria
CAT
Met
>WENV183743108
PJUJ01000039
44886
Gammaproteobacteria
TGA
Ser
>WENV183743210
PJUJ01000157
144982
Gammaproteobacteria
TGG
Pro
>WENV183743094
PJUJ01000030
298259
Gammaproteobacteria
GAA
Phe
>WENV183742995
PJUJ01000006
182303
Gammaproteobacteria
GTG
His
>WENV183743131
PJUJ01000048
95635
Gammaproteobacteria
CAA
Leu
>WENV183743485
PJUJ01002113
235512
Gammaproteobacteria
GGT
Thr
>WENV183743164
PJUJ01000070
266908
Gammaproteobacteria
CGC
Ala
>WENV183743142
PJUJ01000051
338337
Gammaproteobacteria
CCT
Arg
>WENV183742963
PJUJ01000001
353410
Gammaproteobacteria
CTG
Gln
>WENV183743000
PJUJ01000006
16238
Gammaproteobacteria
CGA
Ser
>WENV183743069
PJUJ01000020
23396
Gammaproteobacteria
GGA
Ser
>WENV183742991
PJUJ01000005
145334
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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