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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183803079
PVBE010810491
166654
Gammaproteobacteria
GAC
Val
>WENV183810911
PVBE011527168
235887
Gammaproteobacteria
GTG
His
>WENV183798971
PVBE010463213
246818
Gammaproteobacteria
TTT
Lys
>WENV183799591
PVBE010520465
340011
Gammaproteobacteria
TTG
Gln
>WENV183794656
PVBE010111761
163492
Gammaproteobacteria
TGG
Pro
>WENV183795539
PVBE010179136
163492
Gammaproteobacteria
TGG
Pro
>WENV183804363
PVBE010923187
163492
Gammaproteobacteria
TGG
Pro
>WENV183807564
PVBE011209920
359124
Gammaproteobacteria
TTG
Gln
>WENV183807565
PVBE011209920
359124
Gammaproteobacteria
TTG
Gln
>WENV183801034
PVBE010639364
113631
Gammaproteobacteria
GTA
Tyr
>WENV183794433
PVBE010097661
149035
Gammaproteobacteria
CCG
Arg
>WENV183810841
PVBE011520796
248041
Gammaproteobacteria
GGC
Ala
>WENV183807851
PVBE011240058
236013
Gammaproteobacteria
TGC
Ala
>WENV183811057
PVBE011541999
145260
Gammaproteobacteria
CAT
Met
>WENV183802910
PVBE010796736
160030
Gammaproteobacteria
GGG
Pro
>WENV183807765
PVBE011229568
59177
Gammaproteobacteria
TAA
Leu
>WENV183805099
PVBE010987454
236366
Gammaproteobacteria
GTG
His
>WENV183804499
PVBE010934357
236366
Gammaproteobacteria
GTG
His
>WENV183795503
PVBE010175478
99112
Gammaproteobacteria
TAG
Leu
>WENV183807864
PVBE011241367
153865
Gammaproteobacteria
CCG
Arg
>WENV183796729
PVBE010275023
235452
Gammaproteobacteria
GAA
Phe
>WENV183801889
PVBE010713189
417674
Gammaproteobacteria
GCA
Cys
>WENV183796265
PVBE010233207
417674
Gammaproteobacteria
GCA
Cys
>WENV183808535
PVBE011304669
149036
Gammaproteobacteria
CCA
Trp
>WENV183801035
PVBE010639364
338534
Gammaproteobacteria
TCC
Gly
>WENV183807764
PVBE011229568
413586
Gammaproteobacteria
GCA
Cys
>WENV183804365
PVBE010923187
270709
Gammaproteobacteria
GTG
His
>WENV183799805
PVBE010539327
270709
Gammaproteobacteria
GTG
His
>WENV183810220
PVBE011460156
174801
Gammaproteobacteria
TGG
Pro
>WENV183808623
PVBE011312916
340801
Gammaproteobacteria
CCT
Arg
>WENV183794918
PVBE010133865
6976
Gammaproteobacteria
GCT
Ser
>WENV183798381
PVBE010414657
95590
Gammaproteobacteria
>WENV183799424
PVBE010505992
95750
Gammaproteobacteria
TAG
Leu
>WENV183798727
PVBE010443401
95750
Gammaproteobacteria
TAG
Leu
>WENV183798464
PVBE010421818
95750
Gammaproteobacteria
TAG
Leu
>WENV183797428
PVBE010333443
95750
Gammaproteobacteria
TAG
Leu
>WENV183794501
PVBE010103142
95750
Gammaproteobacteria
TAG
Leu
>WENV183793676
PVBE010033999
95750
Gammaproteobacteria
TAG
Leu
>WENV183793548
PVBE010024247
95750
Gammaproteobacteria
TAG
Leu
>WENV183806068
PVBE011080920
175987
Gammaproteobacteria
CGG
Pro
>WENV183801333
PVBE010666786
175987
Gammaproteobacteria
CGG
Pro
>WENV183794440
PVBE010098115
175987
Gammaproteobacteria
CGG
Pro
>WENV183794230
PVBE010079500
175987
Gammaproteobacteria
CGG
Pro
>WENV183794158
PVBE010074075
175987
Gammaproteobacteria
CGG
Pro
>WENV183801894
PVBE010713962
97105
Gammaproteobacteria
GTA
Tyr
>WENV183797487
PVBE010338308
97105
Gammaproteobacteria
GTA
Tyr
>WENV183811058
PVBE011541999
97031
Gammaproteobacteria
TAG
Leu
>WENV183807862
PVBE011241206
252289
Gammaproteobacteria
TTT
Lys
>WENV183796263
PVBE010233207
252289
Gammaproteobacteria
TTT
Lys
>WENV183811059
PVBE011541999
149038
Gammaproteobacteria
TGG
Pro
>WENV183811084
PVBE011545341
152301
Gammaproteobacteria
GAT
Ile
>WENV183806780
PVBE011146682
152301
Gammaproteobacteria
GAT
Ile
>WENV183794092
PVBE010066404
152301
Gammaproteobacteria
GAT
Ile
>WENV183803364
PVBE010837888
421020
Gammaproteobacteria
GCA
Cys
>WENV183809205
PVBE011365950
150587
Gammaproteobacteria
CAT
Met
>WENV183799360
PVBE010500529
150587
Gammaproteobacteria
CAT
Met
>WENV183793698
PVBE010035474
150587
Gammaproteobacteria
CAT
Met
>WENV183794871
PVBE010129758
62501
Gammaproteobacteria
CAG
Leu
>WENV183807430
PVBE011199274
247974
Gammaproteobacteria
CCA
Trp
>WENV183806709
PVBE011140167
247974
Gammaproteobacteria
CCA
Trp
>WENV183804014
PVBE010894752
247974
Gammaproteobacteria
CCA
Trp
>WENV183798678
PVBE010439319
247974
Gammaproteobacteria
CCA
Trp
>WENV183805770
PVBE011050519
147055
Gammaproteobacteria
TGG
Pro
>WENV183807763
PVBE011229568
237708
Gammaproteobacteria
GCC
Gly
>WENV183797818
PVBE010366726
237708
Gammaproteobacteria
GCC
Gly
>WENV183797817
PVBE010366726
237708
Gammaproteobacteria
GCC
Gly
>WENV183794000
PVBE010059601
237714
Gammaproteobacteria
TAC
Val
>WENV183793999
PVBE010059601
237714
Gammaproteobacteria
TAC
Val
>WENV183793998
PVBE010059601
237714
Gammaproteobacteria
TAC
Val
>WENV183797543
PVBE010342059
173040
Gammaproteobacteria
GAC
Val
>WENV183795177
PVBE010151924
173040
Gammaproteobacteria
GAC
Val
>WENV183801534
PVBE010682629
145713
Gammaproteobacteria
CAT
Met
>WENV183806165
PVBE011090676
411842
Gammaproteobacteria
GCA
Cys
>WENV183805374
PVBE011013761
411842
Gammaproteobacteria
GCA
Cys
>WENV183805241
PVBE011001091
411842
Gammaproteobacteria
GCA
Cys
>WENV183804859
PVBE010966120
411842
Gammaproteobacteria
GCA
Cys
>WENV183804764
PVBE010957330
411842
Gammaproteobacteria
GCA
Cys
>WENV183799293
PVBE010494891
411842
Gammaproteobacteria
GCA
Cys
>WENV183793813
PVBE010044512
411842
Gammaproteobacteria
GCA
Cys
>WENV183794842
PVBE010127184
249882
Gammaproteobacteria
GTT
Asn
>WENV183811302
PVBE011569566
148452
Gammaproteobacteria
CCT
Arg
>WENV183794229
PVBE010079447
148452
Gammaproteobacteria
CCT
Arg
>WENV183803997
PVBE010893500
250885
Gammaproteobacteria
TGC
Ala
>WENV183807455
PVBE011200838
235886
Gammaproteobacteria
TTC
Glu
>WENV183799130
PVBE010478401
341770
Gammaproteobacteria
TTG
Gln
>WENV183794795
PVBE010123675
59460
Gammaproteobacteria
CAA
Leu
>WENV183809683
PVBE011409911
128930
Gammaproteobacteria
GTC
Asp
>WENV183804924
PVBE010972536
128930
Gammaproteobacteria
GTC
Asp
>WENV183796997
PVBE010295201
128930
Gammaproteobacteria
GTC
Asp
>WENV183796819
PVBE010281739
128930
Gammaproteobacteria
GTC
Asp
>WENV183794677
PVBE010112732
65265
Gammaproteobacteria
CAG
Leu
>WENV183806126
PVBE011086994
243485
Gammaproteobacteria
TGT
Thr
>WENV183798241
PVBE010401531
249892
Gammaproteobacteria
GTT
Asn
>WENV183808116
PVBE011264274
262546
Gammaproteobacteria
TGC
Ala
>WENV183808199
PVBE011273560
262546
Gammaproteobacteria
TGC
Ala
>WENV183802941
PVBE010799671
235884
Gammaproteobacteria
TAC
Val
>WENV183802317
PVBE010748436
179790
Gammaproteobacteria
CAT
Met
>WENV183795992
PVBE010216296
179790
Gammaproteobacteria
CAT
Met
>WENV183811940
PVBE011630928
45411
Gammaproteobacteria
GGA
Ser
>WENV183806584
PVBE011130320
101786
Gammaproteobacteria
GAG
Leu
>WENV183803117
PVBE010813731
101786
Gammaproteobacteria
GAG
Leu
>WENV183798854
PVBE010454025
16460
Gammaproteobacteria
TGA
Ser
>WENV183810909
PVBE011527168
157977
Gammaproteobacteria
TGG
Pro
>WENV183799804
PVBE010539327
157977
Gammaproteobacteria
TGG
Pro
>WENV183794867
PVBE010129547
157977
Gammaproteobacteria
TGG
Pro
>WENV183806164
PVBE011090676
270352
Gammaproteobacteria
GCC
Gly
>WENV183804763
PVBE010957330
270352
Gammaproteobacteria
GCC
Gly
>WENV183804346
PVBE010921453
270352
Gammaproteobacteria
GCC
Gly
>WENV183804208
PVBE010909271
270352
Gammaproteobacteria
GCC
Gly
>WENV183803827
PVBE010878313
270352
Gammaproteobacteria
GCC
Gly
>WENV183799292
PVBE010494891
270352
Gammaproteobacteria
GCC
Gly
>WENV183793812
PVBE010044512
270352
Gammaproteobacteria
GCC
Gly
>WENV183801369
PVBE010671002
95603
Gammaproteobacteria
TAG
Leu
>WENV183801367
PVBE010671002
95603
Gammaproteobacteria
TAG
Leu
>WENV183804839
PVBE010964026
344326
Gammaproteobacteria
TTC
Glu
>WENV183807957
PVBE011248807
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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