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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV080363
ABCO01000001
279311
Bacteroidota
GTT
Asn
>WENV080358
ABCO01000001
271719
Bacteroidota
CAT
Met
>WENV080369
ABCO01000002
456729
Bacteroidota
GAA
Phe
>WENV080383
ABCO01000007
285374
Bacteroidota
GTC
Asp
>WENV080370
ABCO01000002
241493
Bacteroidota
TAC
Val
>WENV080393
ABCO01000017
657856
Bacteroidota
TTC
Glu
>WENV080368
ABCO01000002
452277
Bacteroidota
CAT
Met
>WENV080388
ABCO01000009
180640
Bacteroidota
GTA
Tyr
>WENV080392
ABCO01000013
86958
Bacteroidota
TGA
Ser
>WENV080377
ABCO01000005
240659
Bacteroidota
TGG
Pro
>WENV080378
ABCO01000005
240659
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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