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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV082905
BAAW01011305
113016
Gammaproteobacteria
CAG
Leu
>WENV082906
BAAW01011305
113016
Gammaproteobacteria
CAG
Leu
>WENV082870
BAAW01007750
780453
Gammaproteobacteria
CCC
Gly
>WENV082732
BAAW01000095
112369
Gammaproteobacteria
GAG
Leu
>WENV082767
BAAW01000538
184232
Gammaproteobacteria
GTA
Tyr
>WENV082917
BAAW01012265
184232
Gammaproteobacteria
GTA
Tyr
>WENV082757
BAAW01000412
271398
Gammaproteobacteria
TCT
Arg
>WENV082954
BAAW01015027
271398
Gammaproteobacteria
TCT
Arg
>WENV082851
BAAW01004661
274125
Gammaproteobacteria
TCT
Arg
>WENV082855
BAAW01005491
454468
Gammaproteobacteria
TCT
Arg
>WENV082735
BAAW01000180
89482
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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