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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170018800
BBPD01001068
273448
Alphaproteobacteria
CGG
Pro
>WENV170019251
BBPD01006711
454054
Alphaproteobacteria
TGC
Ala
>WENV170018696
BBPD01000414
272978
Alphaproteobacteria
CGG
Pro
>WENV170018802
BBPD01001087
272978
Alphaproteobacteria
CGG
Pro
>WENV170018610
BBPD01000120
455172
Alphaproteobacteria
GGC
Ala
>WENV170018629
BBPD01000189
455172
Alphaproteobacteria
GGC
Ala
>WENV170018573
BBPD01000026
780039
Alphaproteobacteria
GCA
Cys
>WENV170018638
BBPD01000205
464601
Alphaproteobacteria
CGT
Thr
>WENV170018587
BBPD01000051
301299
Alphaproteobacteria
CCG
Arg
>WENV170019425
BBPD01012053
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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