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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170022618
BCQK01026944
464380
Bacillota
GTC
Asp
>WENV170022532
BCQK01018547
218547
Bacillota
GTA
Tyr
>WENV170022531
BCQK01018547
456579
Bacillota
TGT
Thr
>WENV170022760
BCQK01046195
456579
Bacillota
TGT
Thr
>WENV170022535
BCQK01018547
676500
Bacillota
TTG
Gln
>WENV170022241
BCQK01002595
455006
Bacillota
TTT
Lys
>WENV170023206
BCQK01157307
20408
Bacillota
GCT
Ser
>WENV170022206
BCQK01001614
30666
Bacillota
TGA
Ser
>WENV170022394
BCQK01008986
451472
Bacillota
GTC
Asp
>WENV170023051
BCQK01112311
464381
Bacillota
TTT
Lys
>WENV170022242
BCQK01002595
660272
Bacillota
GCC
Gly
>WENV170022536
BCQK01018547
660272
Bacillota
GCC
Gly
>WENV170023053
BCQK01112311
660272
Bacillota
GCC
Gly
>WENV170022762
BCQK01046195
275316
Bacillota
ACG
Arg
>WENV170022533
BCQK01018547
782457
Bacillota
CCA
Trp
>WENV170022530
BCQK01018547
653598
Bacillota
TTC
Glu
>WENV170023207
BCQK01157307
653598
Bacillota
TTC
Glu
>WENV170022534
BCQK01018547
454725
Bacillota
GTG
His
>WENV170022761
BCQK01046195
113109
Bacillota
TAA
Leu
>WENV170022325
BCQK01005362
464384
Bacillota
GAC
Val
>WENV170022528
BCQK01018434
464384
Bacillota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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