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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170149149
CEOC01005332
276372
Gammaproteobacteria
ACG
Arg
>WENV170149248
CEOC01012836
20134
Gammaproteobacteria
GCT
Ser
>WENV170149249
CEOC01012836
276971
Gammaproteobacteria
ACG
Arg
>WENV170149250
CEOC01012836
276971
Gammaproteobacteria
ACG
Arg
>WENV170149253
CEOC01014049
453897
Gammaproteobacteria
TAC
Val
>WENV170149964
CEOC01070257
274093
Gammaproteobacteria
GTC
Asp
>WENV170150007
CEOC01074187
270982
Gammaproteobacteria
GAT
Ile
>WENV170150193
CEOC01094754
781121
Gammaproteobacteria
GCA
Cys
>WENV170150358
CEOC01114357
458351
Gammaproteobacteria
TTG
Gln
>WENV170150402
CEOC01120858
274150
Gammaproteobacteria
CAT
Met
>WENV170150626
CEOC01144473
270982
Gammaproteobacteria
GAT
Ile
>WENV170150757
CEOC01154193
277966
Gammaproteobacteria
CAT
Met
>WENV170150796
CEOC01157988
276972
Gammaproteobacteria
CCA
Trp
>WENV170150966
CEOC01167753
271464
Gammaproteobacteria
TGG
Pro
>WENV170151172
CEOC01237140
113485
Gammaproteobacteria
CAA
Leu
>WENV170151333
CEOC01303624
466510
Gammaproteobacteria
GCC
Gly
>WENV170151446
CEOC01319609
276973
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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