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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170213085
CEPX01009950
276971
Gammaproteobacteria
ACG
Arg
>WENV170214555
CEPX01092920
271456
Gammaproteobacteria
ACG
Arg
>WENV170216296
CEPX01195178
271287
Gammaproteobacteria
CAT
Met
>WENV170213006
CEPX01004327
273749
Gammaproteobacteria
CCA
Trp
>WENV170214010
CEPX01061523
780765
Gammaproteobacteria
CCC
Gly
>WENV170213596
CEPX01039623
273698
Gammaproteobacteria
CCG
Arg
>WENV170213745
CEPX01047893
656944
Gammaproteobacteria
CCT
Arg
>WENV170217125
CEPX01349162
273859
Gammaproteobacteria
CGG
Pro
>WENV170215650
CEPX01169673
464809
Gammaproteobacteria
GAA
Phe
>WENV170213699
CEPX01044980
456234
Gammaproteobacteria
GAA
Phe
>WENV170214237
CEPX01071676
276973
Gammaproteobacteria
GAC
Val
>WENV170214112
CEPX01066094
276973
Gammaproteobacteria
GAC
Val
>WENV170216701
CEPX01246904
112814
Gammaproteobacteria
GAG
Leu
>WENV170214506
CEPX01090184
270982
Gammaproteobacteria
GAT
Ile
>WENV170213103
CEPX01010714
281115
Gammaproteobacteria
GAT
Ile
>WENV170213700
CEPX01045020
283256
Gammaproteobacteria
GAT
Ile
>WENV170213172
CEPX01013735
296667
Gammaproteobacteria
GAT
Ile
>WENV170214475
CEPX01088468
781121
Gammaproteobacteria
GCA
Cys
>WENV170213425
CEPX01028967
780557
Gammaproteobacteria
GCA
Cys
>WENV170213424
CEPX01028967
479074
Gammaproteobacteria
GCC
Gly
>WENV170214554
CEPX01092920
46215
Gammaproteobacteria
GCT
Ser
>WENV170215398
CEPX01152538
30353
Gammaproteobacteria
GGA
Ser
>WENV170213089
CEPX01010118
275006
Gammaproteobacteria
GGG
Pro
>WENV170213659
CEPX01043431
452405
Gammaproteobacteria
GGT
Thr
>WENV170213792
CEPX01050479
218566
Gammaproteobacteria
GTA
Tyr
>WENV170214297
CEPX01076268
218566
Gammaproteobacteria
GTA
Tyr
>WENV170213657
CEPX01043431
218035
Gammaproteobacteria
GTA
Tyr
>WENV170214287
CEPX01075387
273852
Gammaproteobacteria
GTC
Asp
>WENV170213597
CEPX01039623
451782
Gammaproteobacteria
GTG
His
>WENV170213426
CEPX01028967
112817
Gammaproteobacteria
TAA
Leu
>WENV170214286
CEPX01075387
454968
Gammaproteobacteria
TAC
Val
>WENV170213608
CEPX01040287
181700
Gammaproteobacteria
TAG
Leu
>WENV170214387
CEPX01082838
181700
Gammaproteobacteria
TAG
Leu
>WENV170213658
CEPX01043431
653834
Gammaproteobacteria
TCC
Gly
>WENV170213590
CEPX01039544
273858
Gammaproteobacteria
TCT
Arg
>WENV170213825
CEPX01052866
456709
Gammaproteobacteria
TGC
Ala
>WENV170213173
CEPX01013735
452602
Gammaproteobacteria
TGC
Ala
>WENV170213589
CEPX01039544
273857
Gammaproteobacteria
TGG
Pro
>WENV170213656
CEPX01043431
452404
Gammaproteobacteria
TGT
Thr
>WENV170212941
CEPX01001674
464774
Gammaproteobacteria
TTC
Glu
>WENV170214902
CEPX01117334
458352
Gammaproteobacteria
TTG
Gln
>WENV170213179
CEPX01014303
463262
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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