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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170231046
CEQH01115024
451922
Gammaproteobacteria
TGT
Thr
>WENV170230191
CEQH01010915
275457
Gammaproteobacteria
ACG
Arg
>WENV170230232
CEQH01014795
275457
Gammaproteobacteria
ACG
Arg
>WENV170230233
CEQH01014795
275457
Gammaproteobacteria
ACG
Arg
>WENV170230206
CEQH01012573
779604
Gammaproteobacteria
GCA
Cys
>WENV170230610
CEQH01053616
457453
Gammaproteobacteria
TTT
Lys
>WENV170230536
CEQH01047251
452415
Gammaproteobacteria
GTG
His
>WENV170231633
CEQH01247885
180480
Gammaproteobacteria
GTA
Tyr
>WENV170230109
CEQH01004353
656944
Gammaproteobacteria
CCT
Arg
>WENV170231478
CEQH01188478
474520
Gammaproteobacteria
CCA
Trp
>WENV170230946
CEQH01099455
270982
Gammaproteobacteria
GAT
Ile
>WENV170230613
CEQH01053800
456706
Gammaproteobacteria
TGT
Thr
>WENV170230611
CEQH01053799
456706
Gammaproteobacteria
TGT
Thr
>WENV170231133
CEQH01125852
276974
Gammaproteobacteria
GGG
Pro
>WENV170230691
CEQH01064624
276974
Gammaproteobacteria
GGG
Pro
>WENV170230423
CEQH01033646
276974
Gammaproteobacteria
GGG
Pro
>WENV170231336
CEQH01148563
502832
Gammaproteobacteria
GAA
Phe
>WENV170231684
CEQH01263533
273847
Gammaproteobacteria
CCT
Arg
>WENV170231156
CEQH01128339
273857
Gammaproteobacteria
TGG
Pro
>WENV170230282
CEQH01019468
464809
Gammaproteobacteria
GAA
Phe
>WENV170231373
CEQH01150692
276185
Gammaproteobacteria
TGG
Pro
>WENV170230501
CEQH01042558
276973
Gammaproteobacteria
GAC
Val
>WENV170231144
CEQH01127097
273853
Gammaproteobacteria
CAT
Met
>WENV170231629
CEQH01246319
114536
Gammaproteobacteria
CAA
Leu
>WENV170231422
CEQH01158621
87214
Gammaproteobacteria
GGA
Ser
>WENV170231153
CEQH01128184
452412
Gammaproteobacteria
GCC
Gly
>WENV170230566
CEQH01049033
452412
Gammaproteobacteria
GCC
Gly
>WENV170230117
CEQH01004853
452412
Gammaproteobacteria
GCC
Gly
>WENV170230462
CEQH01038548
460378
Gammaproteobacteria
TAC
Val
>WENV170231157
CEQH01128339
273858
Gammaproteobacteria
TCT
Arg
>WENV170231615
CEQH01241884
47267
Gammaproteobacteria
GGA
Ser
>WENV170230347
CEQH01026422
271200
Gammaproteobacteria
CAT
Met
>WENV170231425
CEQH01159381
273327
Gammaproteobacteria
ACG
Arg
>WENV170231096
CEQH01120754
281567
Gammaproteobacteria
CAT
Met
>WENV170231332
CEQH01148375
271613
Gammaproteobacteria
GTC
Asp
>WENV170231310
CEQH01146425
273845
Gammaproteobacteria
GGG
Pro
>WENV170231551
CEQH01216018
780764
Gammaproteobacteria
TCC
Gly
>WENV170230855
CEQH01087357
276972
Gammaproteobacteria
CCA
Trp
>WENV170230063
CEQH01000433
276972
Gammaproteobacteria
CCA
Trp
>WENV170230153
CEQH01008505
453897
Gammaproteobacteria
TAC
Val
>WENV170231641
CEQH01250812
454397
Gammaproteobacteria
TGT
Thr
>WENV170231048
CEQH01115397
112814
Gammaproteobacteria
GAG
Leu
>WENV170231175
CEQH01130483
655194
Gammaproteobacteria
GGT
Thr
>WENV170230770
CEQH01074773
459406
Gammaproteobacteria
TAC
Val
>WENV170230549
CEQH01047802
455293
Gammaproteobacteria
TTT
Lys
>WENV170231072
CEQH01118002
30792
Gammaproteobacteria
GGA
Ser
>WENV170231049
CEQH01115397
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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