This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170241822
CEQO01012082
452603
Gammaproteobacteria
CCA
Trp
>WENV170241897
CEQO01016104
452604
Gammaproteobacteria
TTC
Glu
>WENV170241902
CEQO01016313
779641
Gammaproteobacteria
TCC
Gly
>WENV170241900
CEQO01016313
452607
Gammaproteobacteria
TGT
Thr
>WENV170241901
CEQO01016313
218041
Gammaproteobacteria
GTA
Tyr
>WENV170241903
CEQO01016313
655603
Gammaproteobacteria
GGT
Thr
>WENV170242172
CEQO01035515
452600
Gammaproteobacteria
GTT
Asn
>WENV170242507
CEQO01062271
46525
Gammaproteobacteria
GCT
Ser
>WENV170242508
CEQO01062271
274723
Gammaproteobacteria
ACG
Arg
>WENV170242816
CEQO01087591
653944
Gammaproteobacteria
GCC
Gly
>WENV170242832
CEQO01089105
274150
Gammaproteobacteria
CAT
Met
>WENV170242854
CEQO01092278
781219
Gammaproteobacteria
GCA
Cys
>WENV170242997
CEQO01105767
452605
Gammaproteobacteria
GGC
Ala
>WENV170242998
CEQO01105767
452604
Gammaproteobacteria
TTC
Glu
>WENV170243028
CEQO01109750
452604
Gammaproteobacteria
TTC
Glu
>WENV170243087
CEQO01118650
271617
Gammaproteobacteria
GGG
Pro
>WENV170243227
CEQO01133700
453181
Gammaproteobacteria
GTG
His
>WENV170243228
CEQO01133700
181084
Gammaproteobacteria
TAG
Leu
>WENV170243272
CEQO01136926
452601
Gammaproteobacteria
TTT
Lys
>WENV170243503
CEQO01156446
452600
Gammaproteobacteria
GTT
Asn
>WENV170243667
CEQO01175177
457154
Gammaproteobacteria
GAA
Phe
>WENV170243847
CEQO01239545
452881
Gammaproteobacteria
TGT
Thr
>WENV170243987
CEQO01276730
455237
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK