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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170280981
CERS01008862
276974
Gammaproteobacteria
GGG
Pro
>WENV170281048
CERS01013890
30865
Gammaproteobacteria
GCT
Ser
>WENV170281049
CERS01013890
276971
Gammaproteobacteria
ACG
Arg
>WENV170281050
CERS01013890
276971
Gammaproteobacteria
ACG
Arg
>WENV170281157
CERS01023259
276976
Gammaproteobacteria
TCT
Arg
>WENV170281156
CERS01023259
276975
Gammaproteobacteria
TGG
Pro
>WENV170281200
CERS01027680
113485
Gammaproteobacteria
CAA
Leu
>WENV170281220
CERS01029260
271287
Gammaproteobacteria
CAT
Met
>WENV170281224
CERS01029739
30792
Gammaproteobacteria
GGA
Ser
>WENV170281366
CERS01044609
452881
Gammaproteobacteria
TGT
Thr
>WENV170281442
CERS01052601
457171
Gammaproteobacteria
GTT
Asn
>WENV170281489
CERS01058701
270982
Gammaproteobacteria
GAT
Ile
>WENV170281649
CERS01075383
459731
Gammaproteobacteria
GGT
Thr
>WENV170282581
CERS01192835
780642
Gammaproteobacteria
GCA
Cys
>WENV170282658
CERS01246306
452377
Gammaproteobacteria
GTT
Asn
>WENV170282819
CERS01312803
276970
Gammaproteobacteria
CCG
Arg
>WENV170282849
CERS01316393
278982
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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