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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170305343
CESI01137907
271464
Gammaproteobacteria
TGG
Pro
>WENV170304135
CESI01021610
271393
Gammaproteobacteria
CAT
Met
>WENV170305220
CESI01126566
277479
Gammaproteobacteria
CAT
Met
>WENV170305053
CESI01107410
656944
Gammaproteobacteria
CCT
Arg
>WENV170304772
CESI01076514
270982
Gammaproteobacteria
GAT
Ile
>WENV170304723
CESI01072750
276974
Gammaproteobacteria
GGG
Pro
>WENV170304582
CESI01057850
458351
Gammaproteobacteria
TTG
Gln
>WENV170305222
CESI01126566
657233
Gammaproteobacteria
TTG
Gln
>WENV170304031
CESI01013182
276971
Gammaproteobacteria
ACG
Arg
>WENV170304030
CESI01013182
276971
Gammaproteobacteria
ACG
Arg
>WENV170305682
CESI01161927
780220
Gammaproteobacteria
GCA
Cys
>WENV170304548
CESI01054165
284535
Gammaproteobacteria
CCG
Arg
>WENV170305683
CESI01161927
112792
Gammaproteobacteria
TAA
Leu
>WENV170304232
CESI01028594
271287
Gammaproteobacteria
CAT
Met
>WENV170305681
CESI01161927
454855
Gammaproteobacteria
GCC
Gly
>WENV170304352
CESI01036789
113737
Gammaproteobacteria
CAA
Leu
>WENV170305249
CESI01129849
781121
Gammaproteobacteria
GCA
Cys
>WENV170304001
CESI01010992
459752
Gammaproteobacteria
TTC
Glu
>WENV170305691
CESI01165498
180479
Gammaproteobacteria
CAA
Leu
>WENV170303972
CESI01007503
459731
Gammaproteobacteria
GGT
Thr
>WENV170304201
CESI01026087
276972
Gammaproteobacteria
CCA
Trp
>WENV170305621
CESI01154310
457459
Gammaproteobacteria
GGC
Ala
>WENV170304265
CESI01031546
454397
Gammaproteobacteria
TGT
Thr
>WENV170304438
CESI01044153
276970
Gammaproteobacteria
CCG
Arg
>WENV170304198
CESI01025907
180300
Gammaproteobacteria
GTA
Tyr
>WENV170304954
CESI01095854
276372
Gammaproteobacteria
ACG
Arg
>WENV170304555
CESI01054707
30792
Gammaproteobacteria
GGA
Ser
>WENV170304029
CESI01013182
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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