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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170347489
CETG01140172
218220
Alphaproteobacteria
>WENV170347918
CETG01171709
655166
Alphaproteobacteria
CAC
Val
>WENV170347194
CETG01111574
274224
Alphaproteobacteria
CAT
Met
>WENV170346940
CETG01082702
274224
Alphaproteobacteria
CAT
Met
>WENV170346205
CETG01021030
274138
Alphaproteobacteria
CAT
Met
>WENV170348709
CETG01383981
655359
Alphaproteobacteria
GAC
Val
>WENV170347154
CETG01106106
655361
Alphaproteobacteria
GCC
Gly
>WENV170348496
CETG01296401
654915
Alphaproteobacteria
GCC
Gly
>WENV170347342
CETG01126810
30553
Alphaproteobacteria
GGA
Ser
>WENV170347726
CETG01159379
451742
Alphaproteobacteria
GGC
Ala
>WENV170346376
CETG01034739
455172
Alphaproteobacteria
GGC
Ala
>WENV170347813
CETG01164414
655171
Alphaproteobacteria
GGT
Thr
>WENV170347531
CETG01144879
655363
Alphaproteobacteria
GGT
Thr
>WENV170346921
CETG01080867
274144
Alphaproteobacteria
GTG
His
>WENV170346901
CETG01079288
274144
Alphaproteobacteria
GTG
His
>WENV170346836
CETG01074305
218137
Alphaproteobacteria
TAG
Leu
>WENV170346240
CETG01023269
780331
Alphaproteobacteria
TCC
Gly
>WENV170348665
CETG01363687
273450
Alphaproteobacteria
TCT
Arg
>WENV170348456
CETG01269395
274132
Alphaproteobacteria
TGG
Pro
>WENV170347440
CETG01135083
451759
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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